FFCP PHASE1:Hg19::chr15:79576178..79576222,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559225,ENST00000559979,ENST00000560533_5end | |association_with_transcript=0bp_to_ENST00000559225,ENST00000559979,ENST00000560533_5end | ||
|cluster_id=chr15:79576178..79576222,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_ENST00000559225_5end,CAGE_peak_1_at_ENST00000559979_5end,CAGE_peak_1_at_ENST00000560533_5end | |description=CAGE_peak_1_at_ENST00000559225_5end,CAGE_peak_1_at_ENST00000559979_5end,CAGE_peak_1_at_ENST00000560533_5end | ||
Latest revision as of 04:41, 25 July 2015
| Short description: | p1@ENST00000559225, p1@ENST00000559979, p1@ENST00000560533 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ENST00000559225_5end, CAGE_peak_1_at_ENST00000559979_5end, CAGE_peak_1_at_ENST00000560533_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000559225, ENST00000559979, ENST00000560533_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ENST00000559225p1@ENST00000559979p1@ENST00000560533 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 6.04e-128 | 53 |
| regional part of brain | 6.04e-128 | 53 |
| neural tube | 1.23e-126 | 56 |
| neural rod | 1.23e-126 | 56 |
| future spinal cord | 1.23e-126 | 56 |
| neural keel | 1.23e-126 | 56 |
| regional part of forebrain | 1.35e-108 | 41 |
| forebrain | 1.35e-108 | 41 |
| anterior neural tube | 1.35e-108 | 41 |
| future forebrain | 1.35e-108 | 41 |
Showing 1 to 10 of 97 entries
