FFCP PHASE1:Hg19::chr15:90542449..90542461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90542449..90542461,+ | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_at_chr15:90542449..90542461,+ | |description=CAGE_peak_at_chr15:90542449..90542461,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000322!1.06e-09!3 | |ontology_enrichment_celltype=CL:0000322!1.06e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.35e-09;5!CL:1000746;6.21e-07;7!CL:1000612;6.21e-07;7 | |ontology_enrichment_celltype_v019=CL:0002188;3.35e-09;5!CL:1000746;6.21e-07;7!CL:1000612;6.21e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.49e-09,5;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.09e-13;29!UBERON:0001041;1.05e-12;30 | |ontology_enrichment_development_v019=UBERON:0008947;4.09e-13;29!UBERON:0001041;1.05e-12;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004821!1.06e-09!3;UBERON:0003215!1.06e-09!3;UBERON:0002299!1.06e-09!3;UBERON:0006524!1.06e-09!3;UBERON:0008874!1.06e-09!3;UBERON:0002169!1.06e-09!3;UBERON:0004894!1.06e-09!3;UBERON:0002106!1.64e-09!3;UBERON:0004854!1.64e-09!3;UBERON:0009034!1.64e-09!3;UBERON:0002095!1.64e-09!3;UBERON:0004782!1.64e-09!3;UBERON:0003281!1.64e-09!3;UBERON:0009664!1.64e-09!3;UBERON:0002296!1.64e-09!3;UBERON:0005602!1.64e-09!3;UBERON:0001179!1.64e-09!3;UBERON:0006293!1.64e-09!3;UBERON:0002171!3.32e-08!1;UBERON:0006518!3.32e-08!1;UBERON:0008949!3.32e-08!1;UBERON:0000101!3.32e-08!1;UBERON:0002167!3.32e-08!1;UBERON:0001301!4.07e-08!1;UBERON:0005177!7.01e-08!107;UBERON:0002048!1.79e-07!22;UBERON:0000117!1.79e-07!22;UBERON:0000171!1.79e-07!22;UBERON:0000170!1.79e-07!22;UBERON:0005597!1.79e-07!22;UBERON:0000118!1.79e-07!22;UBERON:0000464!6.52e-07!104 | |ontology_enrichment_uberon=UBERON:0004821!1.06e-09!3;UBERON:0003215!1.06e-09!3;UBERON:0002299!1.06e-09!3;UBERON:0006524!1.06e-09!3;UBERON:0008874!1.06e-09!3;UBERON:0002169!1.06e-09!3;UBERON:0004894!1.06e-09!3;UBERON:0002106!1.64e-09!3;UBERON:0004854!1.64e-09!3;UBERON:0009034!1.64e-09!3;UBERON:0002095!1.64e-09!3;UBERON:0004782!1.64e-09!3;UBERON:0003281!1.64e-09!3;UBERON:0009664!1.64e-09!3;UBERON:0002296!1.64e-09!3;UBERON:0005602!1.64e-09!3;UBERON:0001179!1.64e-09!3;UBERON:0006293!1.64e-09!3;UBERON:0002171!3.32e-08!1;UBERON:0006518!3.32e-08!1;UBERON:0008949!3.32e-08!1;UBERON:0000101!3.32e-08!1;UBERON:0002167!3.32e-08!1;UBERON:0001301!4.07e-08!1;UBERON:0005177!7.01e-08!107;UBERON:0002048!1.79e-07!22;UBERON:0000117!1.79e-07!22;UBERON:0000171!1.79e-07!22;UBERON:0000170!1.79e-07!22;UBERON:0005597!1.79e-07!22;UBERON:0000118!1.79e-07!22;UBERON:0000464!6.52e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0002048;5.27e-17;22!UBERON:0000117;5.27e-17;22!UBERON:0000171;5.27e-17;22!UBERON:0000170;5.27e-17;22!UBERON:0005178;3.89e-10;34!UBERON:0002224;3.89e-10;34!UBERON:0000065;3.29e-08;44!UBERON:0005181;4.47e-08;35!UBERON:0000074;6.21e-07;7!UBERON:0001229;6.21e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0002048;5.27e-17;22!UBERON:0000117;5.27e-17;22!UBERON:0000171;5.27e-17;22!UBERON:0000170;5.27e-17;22!UBERON:0005178;3.89e-10;34!UBERON:0002224;3.89e-10;34!UBERON:0000065;3.29e-08;44!UBERON:0005181;4.47e-08;35!UBERON:0000074;6.21e-07;7!UBERON:0001229;6.21e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.21e-40,1;UBERON:0006518,2.21e-40,1;UBERON:0008949,2.21e-40,1;UBERON:0000101,2.21e-40,1;UBERON:0002167,2.21e-40,1;UBERON:0002048,5.13e-17,22;UBERON:0000117,5.13e-17,22;UBERON:0000171,5.13e-17,22;UBERON:0000170,5.13e-17,22;UBERON:0005597,5.13e-17,22;UBERON:0000118,5.13e-17,22;UBERON:0005178,2.57e-11,34;UBERON:0002224,2.57e-11,34;UBERON:0005181,5.12e-11,35;UBERON:0005153,1.83e-10,37;UBERON:0005177,1.95e-10,101;UBERON:0008947,3.28e-10,38;UBERON:0003258,3.28e-10,38;UBERON:0005157,2.10e-08,47;UBERON:0000915,1.15e-07,52;UBERON:0000065,2.08e-07,54;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
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|short_description=p@chr15:90542449..90542461,+ | |short_description=p@chr15:90542449..90542461,+ | ||
}} | }} |
Latest revision as of 05:26, 25 July 2015
Short description: | p@chr15:90542449..90542461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90542449..90542461, + |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.49e-09 | 5 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.21e-40 | 1 |
right lung lobe | 2.21e-40 | 1 |
lower lobe of lung | 2.21e-40 | 1 |
lobe of lung | 2.21e-40 | 1 |
right lung | 2.21e-40 | 1 |
lung | 5.13e-17 | 22 |
respiratory tube | 5.13e-17 | 22 |
respiration organ | 5.13e-17 | 22 |
pair of lungs | 5.13e-17 | 22 |
lung primordium | 5.13e-17 | 22 |
lung bud | 5.13e-17 | 22 |
thoracic cavity element | 2.57e-11 | 34 |
thoracic cavity | 2.57e-11 | 34 |
thoracic segment organ | 5.12e-11 | 35 |
epithelial bud | 1.83e-10 | 37 |
trunk region element | 1.95e-10 | 101 |
respiratory primordium | 3.28e-10 | 38 |
endoderm of foregut | 3.28e-10 | 38 |
epithelial fold | 2.10e-08 | 47 |
thoracic segment of trunk | 1.15e-07 | 52 |
respiratory tract | 2.08e-07 | 54 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |