FFCP PHASE1:Hg19::chr15:92459332..92459338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:92459332..92459338,+ | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_at_chr15:92459332..92459338,+ | |||
|id=chr15:92459332..92459338,+ | |||
|ontology_enrichment_celltype=CL:0000167!3.50e-14!1;CL:0000164!3.50e-14!1;CL:0000502!3.50e-14!1;CL:0000172!3.50e-14!1;CL:0000173!3.50e-14!1;CL:0002351!3.50e-14!1;CL:0002553!4.53e-14!1;CL:0000312!8.29e-11!5;CL:0000240!3.71e-09!6;CL:0000311!3.71e-09!6;CL:0000079!3.71e-09!6;CL:0000237!3.71e-09!6;CL:0000036!3.71e-09!6;CL:0000357!3.71e-09!6;CL:0000114!3.71e-09!6;CL:0000242!1.45e-07!2;CL:0000362!4.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.42e-50;1!CL:0000164;2.42e-50;1!CL:0000502;2.42e-50;1!CL:0000172;2.42e-50;1!CL:0000173;2.42e-50;1!CL:0002553;5.12e-50;1!CL:0000082;1.91e-11;19!CL:0000150;7.91e-07;9!CL:0000163;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.42e-50,1;CL:0000164,2.42e-50,1;CL:0000502,2.42e-50,1;CL:0000172,2.42e-50,1;CL:0000173,2.42e-50,1;CL:0002351,2.42e-50,1;CL:0002553,6.58e-50,1;CL:0000082,1.91e-11,19;CL:0000150,7.91e-07,9;CL:0000163,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.42e-50;1!UBERON:0008947;7.40e-08;29!UBERON:0001041;1.25e-07;30 | |||
|ontology_enrichment_disease=DOID:4430!3.50e-14!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.42e-50;1!DOID:1324;3.36e-14;15!DOID:5409;1.21e-13;4!DOID:0050615;2.21e-13;16!DOID:4362;2.66e-11;5!DOID:169;1.32e-09;6!DOID:1325;2.26e-08;7!DOID:3904;2.26e-08;7!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.42e-50,1;DOID:1324,3.36e-14,15;DOID:5409,1.13e-13,4;DOID:0050615,2.21e-13,16;DOID:4362,2.66e-11,5;DOID:169,1.32e-09,6;DOID:1325,2.18e-08,7;DOID:3904,2.18e-08,7;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.91e-11;19!UBERON:0000115;1.91e-11;19!UBERON:0002048;4.96e-10;22!UBERON:0004807;4.96e-10;22!UBERON:0000117;4.96e-10;22!UBERON:0000171;4.96e-10;22!UBERON:0000170;4.96e-10;22!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0000072;3.81e-07;37!UBERON:0005181;3.81e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.91e-11,19;UBERON:0000115,1.91e-11,19;UBERON:0002048,4.96e-10,22;UBERON:0000117,4.96e-10,22;UBERON:0000171,4.96e-10,22;UBERON:0000170,4.96e-10,22;UBERON:0005597,4.96e-10,22;UBERON:0000118,4.96e-10,22;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0004807,4.21e-08,28;UBERON:0005178,7.59e-07,34;UBERON:0002224,7.59e-07,34 | |||
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|short_description=p@chr15:92459332..92459338,+ | |||
}} | }} |
Latest revision as of 05:42, 25 July 2015
Short description: | p@chr15:92459332..92459338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:92459332..92459338, + |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.42e-50 | 1 |
enteroendocrine cell | 2.42e-50 | 1 |
type D enteroendocrine cell | 2.42e-50 | 1 |
somatostatin secreting cell | 2.42e-50 | 1 |
pancreatic D cell | 2.42e-50 | 1 |
progenitor cell of endocrine pancreas | 2.42e-50 | 1 |
lung fibroblast | 6.58e-50 | 1 |
epithelial cell of lung | 1.91e-11 | 19 |
glandular epithelial cell | 7.91e-07 | 9 |
endocrine cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.91e-11 | 19 |
lung epithelium | 1.91e-11 | 19 |
lung | 4.96e-10 | 22 |
respiratory tube | 4.96e-10 | 22 |
respiration organ | 4.96e-10 | 22 |
pair of lungs | 4.96e-10 | 22 |
lung primordium | 4.96e-10 | 22 |
lung bud | 4.96e-10 | 22 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
respiratory system epithelium | 4.21e-08 | 28 |
thoracic cavity element | 7.59e-07 | 34 |
thoracic cavity | 7.59e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.42e-50 | 1 |
lung cancer | 3.36e-14 | 15 |
lung small cell carcinoma | 1.13e-13 | 4 |
respiratory system cancer | 2.21e-13 | 16 |
cervical cancer | 2.66e-11 | 5 |
neuroendocrine tumor | 1.32e-09 | 6 |
bronchus cancer | 2.18e-08 | 7 |
bronchogenic carcinoma | 2.18e-08 | 7 |
lung carcinoma | 8.37e-07 | 9 |