FFCP PHASE1:Hg19::chr15:99669992..99670021,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:99669992..99670021,+ to FFCP PHASE1:Hg19::chr15:99669992..99670021,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:99669992..99670021,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr15:99669992..99670021,+ | |||
|id=chr15:99669992..99670021,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.47e-11;4!UBERON:0007284;4.47e-11;4!UBERON:0007297;5.93e-11;2!UBERON:0006603;9.94e-10;65!UBERON:0003104;3.27e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.87e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.95e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.33e-54!115;UBERON:0001049!3.30e-25!57;UBERON:0005068!3.30e-25!57;UBERON:0006241!3.30e-25!57;UBERON:0007135!3.30e-25!57;UBERON:0002616!8.36e-21!59;UBERON:0002780!1.71e-20!41;UBERON:0001890!1.71e-20!41;UBERON:0006240!1.71e-20!41;UBERON:0003075!2.98e-20!86;UBERON:0007284!2.98e-20!86;UBERON:0001017!6.68e-20!82;UBERON:0003080!9.22e-20!42;UBERON:0000955!2.02e-19!69;UBERON:0006238!2.02e-19!69;UBERON:0005743!2.44e-19!86;UBERON:0002346!1.20e-18!90;UBERON:0000073!4.99e-17!94;UBERON:0001016!4.99e-17!94;UBERON:0002020!2.26e-16!34;UBERON:0003528!2.26e-16!34;UBERON:0001893!4.26e-16!34;UBERON:0002791!2.48e-15!33;UBERON:0000153!2.46e-14!129;UBERON:0007811!2.46e-14!129;UBERON:0001869!2.66e-14!32;UBERON:0003056!3.61e-14!61;UBERON:0000033!4.29e-14!123;UBERON:0004121!1.39e-12!169;UBERON:0000924!7.14e-12!173;UBERON:0006601!7.14e-12!173;UBERON:0000956!6.37e-10!25;UBERON:0000203!6.37e-10!25;UBERON:0004111!1.09e-09!241;UBERON:0002619!3.30e-09!22;UBERON:0000477!3.33e-09!286;UBERON:0001950!5.12e-09!20;UBERON:0002308!1.33e-08!9;UBERON:0000125!1.33e-08!9;UBERON:0002420!2.47e-08!9;UBERON:0007245!2.47e-08!9;UBERON:0010009!2.47e-08!9;UBERON:0010011!2.47e-08!9;UBERON:0000454!2.47e-08!9;UBERON:0000468!4.49e-08!659;UBERON:0000025!5.41e-08!194;UBERON:0000481!6.81e-08!347;UBERON:0002298!2.50e-07!8;UBERON:0000062!2.50e-07!511;UBERON:0000475!3.05e-07!365;UBERON:0001871!6.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.81e-15;3!UBERON:0004054;1.81e-15;3!UBERON:0003978;1.34e-14;3!UBERON:0000946;1.34e-14;3!UBERON:0005904;1.01e-11;4!UBERON:0005090;1.32e-10;2!UBERON:0001630;1.32e-10;2!UBERON:0001875;4.40e-10;2!UBERON:0002133;4.40e-10;2!UBERON:0006514;4.40e-10;2!UBERON:0007100;2.36e-08;25!UBERON:0000125;2.87e-08;9!UBERON:0002308;2.87e-08;9!UBERON:0007023;4.55e-08;114!UBERON:0001723;1.53e-07;3!UBERON:0001033;1.53e-07;3!UBERON:0002298;1.56e-07;6!UBERON:0003135;2.20e-07;11!UBERON:0001896;3.22e-07;3!UBERON:0005290;3.22e-07;3!UBERON:0004151;5.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.86e-33,114;UBERON:0006947,1.91e-15,3;UBERON:0004054,1.91e-15,3;UBERON:0003978,5.75e-15,3;UBERON:0009751,5.75e-15,3;UBERON:0000946,5.75e-15,3;UBERON:0002523,5.75e-15,3;UBERON:0005983,5.75e-15,3;UBERON:0002165,5.75e-15,3;UBERON:0002062,5.75e-15,3;UBERON:0007280,5.75e-15,3;UBERON:0005904,1.05e-11,4;UBERON:0005090,7.96e-11,2;UBERON:0001630,7.96e-11,2;UBERON:0002133,2.08e-10,2;UBERON:0001875,4.42e-10,2;UBERON:0006514,4.42e-10,2;UBERON:0003103,3.99e-09,68;UBERON:0000125,2.88e-08,9;UBERON:0002308,2.88e-08,9;UBERON:0007100,1.08e-07,27;UBERON:0001723,1.53e-07,3;UBERON:0001033,1.53e-07,3;UBERON:0010056,1.53e-07,3;UBERON:0002298,1.57e-07,6;UBERON:0003135,2.24e-07,11;UBERON:0001896,2.89e-07,3;UBERON:0005290,2.89e-07,3;UBERON:0010096,2.89e-07,3;UBERON:0004151,4.76e-07,3;UBERON:0003075,9.86e-07,82;UBERON:0007284,9.86e-07,82 | |||
|phase1_expression=0,0.856402095563933,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.256686072559497,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,1.59398390600856,0.828851746593443,0,0.102268682502155,0,0,0,0.179021174675609,0,5.52403071566828,0,0,0,0.463840490809256,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.482385754501632,0,0.774054819518572,0.295547618953547,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.471807930864739,1.60515529459758,0.702793337176017,0,0,0,2.36750641709634,3.62972148145992,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0.51595809741485,0.483781656445426,0.219267951258557,0.328461828212837,3.20063754411784,0,0.90392296312213,0,0,0.253243183823515,0,0,1.06726497369676,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,1.20084057741958,1.36905378891993,0,0,0,1.95497680890578,2.7499250881402,1.43574604915363,2.1964690054889,16.7398158773263,1.11585728720936,0.53746777989381,0,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.19009341568421,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0.157054096250234,0,0.610131324509816,1.001527445652,2.29363678276028,1.44207766997908,0.434674820589684,0.138348634936231,0,0,0.285465333544967,0.235265819698172,2.81000943484129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0.172214979660816,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.385375350578757,0,0.957803154342908,0.41023272848151,0,0.138314504928436,2.26065903884592,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.253663240775627,0,0.548257766857182,7.44316767583941,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0.115233987555779,0.171488009437418,0.135939465953663,0.328863867814245,0.236387681767936,0.444925607568277,1.33438257845874,0.785577949580009,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0,0,0,0,0,5.08064460229115,0,0,0,0,0,0,5.82685953469105,1.64260490969995,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,1.09279780251979,0,22.0633489578515,0,0.981542335574726,1.18818560130834,0,0,0,0,0,0,0,0,1.46067277649303,0.917458566809082,1.43339583151451,0,0.0679914901909147,0,1.0580536810308,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0.803892390468535,0,1.55149493792843,2.77204176471275,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,4.78976845373315,2.39563310759697,0.134704106029175,0.358611026963382,0.665320713092027,0,0,0,0,11.7320471201727,0,0,1.33151354837103,0.402547587182052,0 | |phase1_expression=0,0.856402095563933,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.256686072559497,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,1.59398390600856,0.828851746593443,0,0.102268682502155,0,0,0,0.179021174675609,0,5.52403071566828,0,0,0,0.463840490809256,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.482385754501632,0,0.774054819518572,0.295547618953547,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.471807930864739,1.60515529459758,0.702793337176017,0,0,0,2.36750641709634,3.62972148145992,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,2.62090002363045,0.51595809741485,0.483781656445426,0.219267951258557,0.328461828212837,3.20063754411784,0,0.90392296312213,0,0,0.253243183823515,0,0,1.06726497369676,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,1.20084057741958,1.36905378891993,0,0,0,1.95497680890578,2.7499250881402,1.43574604915363,2.1964690054889,16.7398158773263,1.11585728720936,0.53746777989381,0,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0,0,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.19009341568421,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0.157054096250234,0,0.610131324509816,1.001527445652,2.29363678276028,1.44207766997908,0.434674820589684,0.138348634936231,0,0,0.285465333544967,0.235265819698172,2.81000943484129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0.691292180758654,0,0,0,0.655219697692825,0,0,0,0,0.172214979660816,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.385375350578757,0,0.957803154342908,0.41023272848151,0,0.138314504928436,2.26065903884592,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.253663240775627,0,0.548257766857182,7.44316767583941,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0.115233987555779,0.171488009437418,0.135939465953663,0.328863867814245,0.236387681767936,0.444925607568277,1.33438257845874,0.785577949580009,0,0,0,0,0.428859265059938,0,0,0.173858272302579,0,0,0,0,0,0,0,5.08064460229115,0,0,0,0,0,0,5.82685953469105,1.64260490969995,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,1.09279780251979,0,22.0633489578515,0,0.981542335574726,1.18818560130834,0,0,0,0,0,0,0,0,1.46067277649303,0.917458566809082,1.43339583151451,0,0.0679914901909147,0,1.0580536810308,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0.803892390468535,0,1.55149493792843,2.77204176471275,0.476128862927481,0,0,0,0.0636471582781649,0.202117188958219,4.78976845373315,2.39563310759697,0.134704106029175,0.358611026963382,0.665320713092027,0,0,0,0,11.7320471201727,0,0,1.33151354837103,0.402547587182052,0 | ||
|short_description=p@chr15:99669992..99670021,+ | |||
}} | }} |
Latest revision as of 06:00, 25 July 2015
Short description: | p@chr15:99669992..99670021, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:99669992..99670021, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.86e-33 | 114 |
male genital duct | 1.91e-15 | 3 |
internal male genitalia | 1.91e-15 | 3 |
valve | 5.75e-15 | 3 |
cardiac mesenchyme | 5.75e-15 | 3 |
cardial valve | 5.75e-15 | 3 |
tunica intima | 5.75e-15 | 3 |
heart layer | 5.75e-15 | 3 |
endocardium | 5.75e-15 | 3 |
endocardial cushion | 5.75e-15 | 3 |
presumptive endocardium | 5.75e-15 | 3 |
duct of male reproductive system | 1.05e-11 | 4 |
muscle structure | 7.96e-11 | 2 |
muscle organ | 7.96e-11 | 2 |
atrioventricular valve | 2.08e-10 | 2 |
globus pallidus | 4.42e-10 | 2 |
pallidum | 4.42e-10 | 2 |
compound organ | 3.99e-09 | 68 |
neural nucleus | 2.88e-08 | 9 |
nucleus of brain | 2.88e-08 | 9 |
primary circulatory organ | 1.08e-07 | 27 |
tongue | 1.53e-07 | 3 |
gustatory system | 1.53e-07 | 3 |
future tongue | 1.53e-07 | 3 |
brainstem | 1.57e-07 | 6 |
male reproductive organ | 2.24e-07 | 11 |
medulla oblongata | 2.89e-07 | 3 |
myelencephalon | 2.89e-07 | 3 |
future myelencephalon | 2.89e-07 | 3 |
cardiac chamber | 4.76e-07 | 3 |
neural plate | 9.86e-07 | 82 |
presumptive neural plate | 9.86e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.95e-11 | 2 |