FFCP PHASE1:Hg19::chr16:30078577..30078622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30078577..30078622,- | |||
|description=CAGE_peak_at_chr16:30078577..30078622,- | |description=CAGE_peak_at_chr16:30078577..30078622,- | ||
|id=chr16:30078577..30078622,- | |id=chr16:30078577..30078622,- | ||
|ontology_enrichment_celltype=CL:0000393!1.87e-07!60;CL:0000211!1.87e-07!60;CL:0000680!3.48e-07!57;CL:0000056!3.48e-07!57;CL:0000355!3.48e-07!57;CL:0000222!4.12e-07!119;CL:0000183!6.23e-07!59;CL:0000187!7.35e-07!54;CL:0000055!9.52e-07!180 | |ontology_enrichment_celltype=CL:0000393!1.87e-07!60;CL:0000211!1.87e-07!60;CL:0000680!3.48e-07!57;CL:0000056!3.48e-07!57;CL:0000355!3.48e-07!57;CL:0000222!4.12e-07!119;CL:0000183!6.23e-07!59;CL:0000187!7.35e-07!54;CL:0000055!9.52e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.74e-08,61;CL:0000211,9.74e-08,61;CL:0000222,2.79e-07,121;CL:0000680,2.80e-07,58;CL:0000056,2.80e-07,58;CL:0000355,2.80e-07,58;CL:0000187,4.15e-07,55;CL:0000192,7.45e-07,43;CL:0000514,7.45e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.89e-10!82;UBERON:0004290!3.00e-09!70;UBERON:0001134!8.43e-09!61;UBERON:0002036!8.43e-09!61;UBERON:0003082!8.43e-09!61;UBERON:0002385!9.58e-09!63;UBERON:0001015!9.58e-09!63;UBERON:0000383!9.58e-09!63;UBERON:0000914!4.03e-08!83;UBERON:0002329!4.03e-08!83;UBERON:0003077!4.03e-08!83;UBERON:0003059!4.03e-08!83;UBERON:0007282!4.03e-08!83;UBERON:0009618!4.03e-08!83;UBERON:0007285!4.03e-08!83;UBERON:0005256!1.89e-07!143;UBERON:0004872!5.94e-07!84 | |ontology_enrichment_uberon=UBERON:0000486!3.89e-10!82;UBERON:0004290!3.00e-09!70;UBERON:0001134!8.43e-09!61;UBERON:0002036!8.43e-09!61;UBERON:0003082!8.43e-09!61;UBERON:0002385!9.58e-09!63;UBERON:0001015!9.58e-09!63;UBERON:0000383!9.58e-09!63;UBERON:0000914!4.03e-08!83;UBERON:0002329!4.03e-08!83;UBERON:0003077!4.03e-08!83;UBERON:0003059!4.03e-08!83;UBERON:0007282!4.03e-08!83;UBERON:0009618!4.03e-08!83;UBERON:0007285!4.03e-08!83;UBERON:0005256!1.89e-07!143;UBERON:0004872!5.94e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.84e-10,83;UBERON:0007503,6.37e-10,78;UBERON:0007524,9.10e-10,73;UBERON:0003077,2.20e-09,72;UBERON:0007285,2.20e-09,72;UBERON:0002329,2.43e-09,71;UBERON:0003059,2.43e-09,71;UBERON:0007282,2.43e-09,71;UBERON:0004290,2.43e-09,71;UBERON:0009618,2.43e-09,71;UBERON:0001134,5.89e-09,62;UBERON:0002036,5.89e-09,62;UBERON:0003082,5.89e-09,62;UBERON:0002385,6.62e-09,64;UBERON:0001015,6.62e-09,64;UBERON:0000383,6.62e-09,64;UBERON:0005256,1.58e-07,122;UBERON:0000490,2.48e-07,148;UBERON:0003914,5.86e-07,117;UBERON:0004872,7.33e-07,83 | |||
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| ||
|short_description=p@chr16:30078577..30078622,- | |short_description=p@chr16:30078577..30078622,- | ||
}} | }} |
Latest revision as of 08:03, 25 July 2015
Short description: | p@chr16:30078577..30078622, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30078577..30078622, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.74e-08 | 61 |
electrically active cell | 9.74e-08 | 61 |
mesodermal cell | 2.79e-07 | 121 |
muscle precursor cell | 2.80e-07 | 58 |
myoblast | 2.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-07 | 58 |
muscle cell | 4.15e-07 | 55 |
smooth muscle cell | 7.45e-07 | 43 |
smooth muscle myoblast | 7.45e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.84e-10 | 83 |
epithelial vesicle | 6.37e-10 | 78 |
dense mesenchyme tissue | 9.10e-10 | 73 |
paraxial mesoderm | 2.20e-09 | 72 |
presumptive paraxial mesoderm | 2.20e-09 | 72 |
somite | 2.43e-09 | 71 |
presomitic mesoderm | 2.43e-09 | 71 |
presumptive segmental plate | 2.43e-09 | 71 |
dermomyotome | 2.43e-09 | 71 |
trunk paraxial mesoderm | 2.43e-09 | 71 |
skeletal muscle tissue | 5.89e-09 | 62 |
striated muscle tissue | 5.89e-09 | 62 |
myotome | 5.89e-09 | 62 |
muscle tissue | 6.62e-09 | 64 |
musculature | 6.62e-09 | 64 |
musculature of body | 6.62e-09 | 64 |
trunk mesenchyme | 1.58e-07 | 122 |
unilaminar epithelium | 2.48e-07 | 148 |
epithelial tube | 5.86e-07 | 117 |
splanchnic layer of lateral plate mesoderm | 7.33e-07 | 83 |