FFCP PHASE1:Hg19::chr17:1532273..1532296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1532273..1532296,+ | |||
|coexpression_cluster_id=C3313 | |coexpression_cluster_id=C3313 | ||
|description=CAGE_peak_at_chr17:1532273..1532296,+ | |description=CAGE_peak_at_chr17:1532273..1532296,+ | ||
|id=chr17:1532273..1532296,+ | |id=chr17:1532273..1532296,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.40e-52;33!CL:0002057;3.40e-52;33!CL:0000576;4.48e-34;48!CL:0000473;1.06e-33;39!CL:0000234;1.06e-33;39!CL:0000766;3.18e-27;69!CL:0000094;2.81e-22;8!CL:0000081;6.66e-16;11!CL:0000775;1.61e-12;3!CL:0000767;3.15e-11;3!CL:0000763;5.61e-11;100!CL:0002087;6.06e-10;104!CL:0000738;2.41e-07;136 | |ontology_enrichment_celltype=CL:0002057!4.70e-35!42;CL:0000860!5.78e-34!45;CL:0000766!2.95e-29!76;CL:0000839!4.16e-25!70;CL:0000557!1.56e-24!71;CL:0002009!4.53e-23!65;CL:0002194!4.90e-22!63;CL:0000576!4.90e-22!63;CL:0000040!4.90e-22!63;CL:0000559!4.90e-22!63;CL:0000738!2.80e-19!140;CL:0000763!5.40e-18!112;CL:0000049!5.40e-18!112;CL:0002031!2.66e-16!124;CL:0000037!7.82e-14!172;CL:0000566!7.82e-14!172;CL:0002087!1.66e-13!119;CL:0000988!4.38e-13!182;CL:0002032!7.07e-13!165;CL:0000837!7.07e-13!165;CL:0002393!2.16e-08!9;CL:0002397!2.16e-08!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.40e-52;33!CL:0002057;3.40e-52;33!CL:0000576;4.48e-34;48!CL:0000473;1.06e-33;39!CL:0000234;1.06e-33;39!CL:0000766;3.18e-27;69!CL:0000094;2.81e-22;8!CL:0000081;6.66e-16;11!CL:0000775;1.61e-12;3!CL:0000767;3.15e-11;3!CL:0000763;5.61e-11;100!CL:0002087;6.06e-10;104!CL:0000738;2.41e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-59,42;CL:0002057,2.93e-59,42;CL:0000766,8.88e-52,72;CL:0000473,6.30e-51,48;CL:0000234,6.30e-51,48;CL:0002194,2.88e-39,59;CL:0000576,2.88e-39,59;CL:0000040,2.88e-39,59;CL:0000559,2.88e-39,59;CL:0002009,9.17e-38,61;CL:0000839,2.13e-34,66;CL:0000763,8.67e-34,108;CL:0000049,8.67e-34,108;CL:0000557,8.73e-34,67;CL:0000738,3.09e-32,136;CL:0000037,8.88e-26,168;CL:0002087,6.58e-25,115;CL:0002032,3.88e-24,161;CL:0000837,3.88e-24,161;CL:0000988,5.64e-24,177;CL:0000094,2.24e-22,8;CL:0002031,2.99e-20,120;CL:0000081,5.66e-16,11;CL:0000775,1.60e-12,3;CL:0000767,2.44e-11,3;CL:0000134,1.40e-08,354;CL:0002320,3.16e-08,361;CL:0000219,5.41e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-42;42!CL:0000049;2.74e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;2.10e-10;15!UBERON:0000179;2.10e-10;15!UBERON:0000463;2.10e-10;15!UBERON:0002390;2.17e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.06e-30!102;UBERON:0003061!9.06e-30!102;UBERON:0002193!4.27e-29!112;UBERON:0002371!1.98e-23!80;UBERON:0001474!8.02e-21!86;UBERON:0002405!6.63e-18!115;UBERON:0004765!4.20e-15!101;UBERON:0001434!4.20e-15!101;UBERON:0003081!1.28e-10!216;UBERON:0002204!2.74e-07!167;UBERON:0000178!8.32e-07!15;UBERON:0000179!8.32e-07!15;UBERON:0000463!8.32e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-10;15!UBERON:0000179;2.10e-10;15!UBERON:0000463;2.10e-10;15!UBERON:0002390;2.17e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.29e-40,98;UBERON:0003061,6.29e-40,98;UBERON:0002193,2.04e-35,108;UBERON:0002371,2.56e-31,76;UBERON:0001474,1.64e-28,82;UBERON:0002405,2.52e-26,93;UBERON:0004765,2.38e-25,90;UBERON:0001434,4.17e-22,100;UBERON:0003081,5.79e-17,203;UBERON:0000178,1.53e-10,15;UBERON:0000179,1.53e-10,15;UBERON:0000463,1.53e-10,15;UBERON:0002204,1.88e-10,167;UBERON:0000926,1.87e-08,315;UBERON:0004120,1.87e-08,315;UBERON:0006603,1.87e-08,315;UBERON:0002384,9.52e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.410623275218653,0,0,0.246301768349837,0.0787107813136792,1.18009283054671,1.91914699048606,2.94150634300544,0,0.6024118375565,0,0.309868802321207,0,0.293600439334847,5.53995408531877,3.60980005446255,3.03815219002193,0.223915474239924,0,0,1.45398238779565,1.88937971844405,1.4555043671269,0.697287110717054,1.6446715520873,1.54853185447552,3.74000110018796,2.30544635876191,1.41889337933151,3.7922024881028,0.645484683583826,1.35426486594342,0.752969358170419,1.36453075028923,2.24723484445085,3.67300670845083,1.28371610830437,0.639337125799041,0.659702600373432,1.59570926097305,1.70489900213078,3.48251086354301,0.56738522469114,0.622822248995575,0.75374599577023,1.0429658368404,1.73751075764093,1.21079900526674,1.84138817993782,2.53169909952708,0.633765858935825,0.637812899895131,0.628975936525128,1.46027220490444,1.05123824989054,0.964353520182481,1.14005097496499,0.79566670879636,0.730656615058536,0,1.09227722252426,0,0,1.20118796110804,0.574752439954483,0.661044872784862,3.81621501814146,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.523916301990851,0,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0,0.74291500265913,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,1.53316637465883,0,0,10.5424333948851,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0.492663237895943,0.528290604079356,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0.862510299438069,0,0,0,0,0.670065061337395,1.91381625495949,4.49404214368309,5.9832291840805,6.21623270154053,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0,0,1.94142780736755,1.28073069364133,0.606255142892519,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0,0.082509499920588,0,0.650060246036521,1.6068392984416,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,1.52234282769651,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,1.29694662238543,1.62009431171434,2.37937552888281,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0.724999575434793,0.1137934482855,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.884634079449797,0.295547618953547,0,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.219267951258557,0,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0.248505071130865,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.544813624446302,0,0.412618309791701,0.415440338029185,0.2249738915515,0.77380195455795,0.364497339948148,0,0.157611414598396,0.104909176269996,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.125190930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| ||
|short_description=p@chr17:1532273..1532296,+ | |short_description=p@chr17:1532273..1532296,+ | ||
}} | }} |
Latest revision as of 14:00, 25 July 2015
Short description: | p@chr17:1532273..1532296, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1532273..1532296, + |
Coexpression cluster: | C3313_Eosinophils_Basophils_CD14_Neutrophils_Peripheral_Whole_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-59 | 42 |
myeloid leukocyte | 8.88e-52 | 72 |
defensive cell | 6.30e-51 | 48 |
phagocyte | 6.30e-51 | 48 |
monopoietic cell | 2.88e-39 | 59 |
monocyte | 2.88e-39 | 59 |
monoblast | 2.88e-39 | 59 |
promonocyte | 2.88e-39 | 59 |
macrophage dendritic cell progenitor | 9.17e-38 | 61 |
myeloid lineage restricted progenitor cell | 2.13e-34 | 66 |
myeloid cell | 8.67e-34 | 108 |
common myeloid progenitor | 8.67e-34 | 108 |
granulocyte monocyte progenitor cell | 8.73e-34 | 67 |
leukocyte | 3.09e-32 | 136 |
hematopoietic stem cell | 8.88e-26 | 168 |
nongranular leukocyte | 6.58e-25 | 115 |
hematopoietic oligopotent progenitor cell | 3.88e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.88e-24 | 161 |
hematopoietic cell | 5.64e-24 | 177 |
granulocyte | 2.24e-22 | 8 |
hematopoietic lineage restricted progenitor cell | 2.99e-20 | 120 |
blood cell | 5.66e-16 | 11 |
neutrophil | 1.60e-12 | 3 |
basophil | 2.44e-11 | 3 |
mesenchymal cell | 1.40e-08 | 354 |
connective tissue cell | 3.16e-08 | 361 |
motile cell | 5.41e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.29e-40 | 98 |
blood island | 6.29e-40 | 98 |
hemolymphoid system | 2.04e-35 | 108 |
bone marrow | 2.56e-31 | 76 |
bone element | 1.64e-28 | 82 |
immune system | 2.52e-26 | 93 |
skeletal element | 2.38e-25 | 90 |
skeletal system | 4.17e-22 | 100 |
lateral plate mesoderm | 5.79e-17 | 203 |
blood | 1.53e-10 | 15 |
haemolymphatic fluid | 1.53e-10 | 15 |
organism substance | 1.53e-10 | 15 |
musculoskeletal system | 1.88e-10 | 167 |
mesoderm | 1.87e-08 | 315 |
mesoderm-derived structure | 1.87e-08 | 315 |
presumptive mesoderm | 1.87e-08 | 315 |
connective tissue | 9.52e-08 | 371 |