FFCP PHASE1:Hg19::chr17:29886300..29886309,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:29886300..29886309,+ | |||
|description=CAGE_peak_at_chr17:29886300..29886309,+ | |||
|id=chr17:29886300..29886309,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.31e-20!42;CL:0000860!2.55e-18!45;CL:0002009!2.20e-15!65;CL:0002194!5.25e-15!63;CL:0000576!5.25e-15!63;CL:0000040!5.25e-15!63;CL:0000559!5.25e-15!63;CL:0000557!5.09e-14!71;CL:0000839!2.71e-13!70;CL:0000048!5.38e-12!430;CL:0000766!2.05e-11!76;CL:0000723!2.12e-11!436;CL:0000034!1.22e-10!444;CL:0002371!1.63e-10!591;CL:0000144!2.25e-10!625;CL:0000548!5.60e-09!679;CL:0000004!5.60e-09!679;CL:0000255!5.60e-09!679;CL:0000012!9.40e-09!682;CL:0002320!5.52e-08!365;CL:0000134!8.05e-08!358;CL:0000219!6.61e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.90e-24;33!CL:0002057;3.90e-24;33!CL:0000473;1.06e-21;39!CL:0000234;1.06e-21;39!CL:0000576;2.13e-10;48!CL:0000766;4.56e-09;69!CL:0000511;5.74e-09;1!CL:0002625;5.74e-09;1!CL:0000228;5.74e-09;1!CL:0000216;5.74e-09;1!CL:0002372;5.74e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.26e-21,48;CL:0000234,5.26e-21,48;CL:0000860,2.83e-20,42;CL:0002057,2.83e-20,42;CL:0002194,2.19e-16,59;CL:0000576,2.19e-16,59;CL:0000040,2.19e-16,59;CL:0000559,2.19e-16,59;CL:0002009,8.65e-16,61;CL:0000839,1.87e-14,66;CL:0000557,3.28e-14,67;CL:0000766,4.29e-13,72;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1;CL:0000228,4.19e-09,1;CL:0002372,4.19e-09,1;CL:0000763,4.46e-08,108;CL:0000049,4.46e-08,108;CL:0002087,1.83e-07,115;CL:0002031,4.52e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.74e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.03e-15!167;UBERON:0002371!5.81e-15!80;UBERON:0004765!1.78e-14!101;UBERON:0001434!1.78e-14!101;UBERON:0001474!4.55e-13!86;UBERON:0002193!9.79e-12!112;UBERON:0002390!4.33e-11!102;UBERON:0003061!4.33e-11!102;UBERON:0002405!1.84e-10!115;UBERON:0002384!6.01e-08!375;UBERON:0000926!3.90e-07!448;UBERON:0004120!3.90e-07!448;UBERON:0006603!3.90e-07!448;UBERON:0003081!6.01e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.74e-09;1!UBERON:0001343;5.74e-09;1!UBERON:0004910;5.74e-09;1!UBERON:0004813;5.74e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-14,76;UBERON:0001474,2.24e-13,82;UBERON:0004765,5.38e-12,90;UBERON:0002405,1.54e-11,93;UBERON:0002390,7.74e-11,98;UBERON:0003061,7.74e-11,98;UBERON:0001434,1.41e-10,100;UBERON:0002193,1.25e-09,108;UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0002204,9.44e-09,167;UBERON:0000926,4.63e-07,315;UBERON:0004120,4.63e-07,315;UBERON:0006603,4.63e-07,315;UBERON:0003081,9.91e-07,203 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.755751887377619,0,0.929716147622738,1.6446715520873,0.929119112685311,0.28769239232215,1.2808035326455,0.709446689665756,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0.818718450173537,0.224723484445085,0.918251677112708,0.641858054152187,1.27867425159808,0,0,0.426224750532694,3.19230162491442,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,2.21523671208619,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,2.1185468930115,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,2.02531598689519,0.0974370051611986,0.757301322732344,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,2.10833939483032,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0,0,0.232420756919918,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.95460974377781,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,1.70388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0,0,0,0.159296767163702,1.34940933649081,0.155262956876259,0.414706207840855,0,0,0.300515217994437,0,0,0,0,0.464033759878494,0.398095888698616,0,1.03018711554838,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0.353378291891762,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:29886300..29886309,+ | |||
}} |
Latest revision as of 15:24, 25 July 2015
Short description: | p@chr17:29886300..29886309, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:29886300..29886309, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.26e-21 | 48 |
phagocyte | 5.26e-21 | 48 |
classical monocyte | 2.83e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-20 | 42 |
monopoietic cell | 2.19e-16 | 59 |
monocyte | 2.19e-16 | 59 |
monoblast | 2.19e-16 | 59 |
promonocyte | 2.19e-16 | 59 |
macrophage dendritic cell progenitor | 8.65e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.87e-14 | 66 |
granulocyte monocyte progenitor cell | 3.28e-14 | 67 |
myeloid leukocyte | 4.29e-13 | 72 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
multinucleate cell | 4.19e-09 | 1 |
myotube | 4.19e-09 | 1 |
myeloid cell | 4.46e-08 | 108 |
common myeloid progenitor | 4.46e-08 | 108 |
nongranular leukocyte | 1.83e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 4.52e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-14 | 76 |
bone element | 2.24e-13 | 82 |
skeletal element | 5.38e-12 | 90 |
immune system | 1.54e-11 | 93 |
hematopoietic system | 7.74e-11 | 98 |
blood island | 7.74e-11 | 98 |
skeletal system | 1.41e-10 | 100 |
hemolymphoid system | 1.25e-09 | 108 |
mesothelium | 3.58e-09 | 1 |
seminiferous tubule of testis | 3.58e-09 | 1 |
epithelium of male gonad | 3.58e-09 | 1 |
epithelial cord | 3.58e-09 | 1 |
sex cord | 3.58e-09 | 1 |
seminiferous tubule epithelium | 3.58e-09 | 1 |
testis sex cord | 3.58e-09 | 1 |
genital ridge | 3.58e-09 | 1 |
primitive sex cord of indifferent gonad | 3.58e-09 | 1 |
coelomic epithelium | 3.58e-09 | 1 |
musculoskeletal system | 9.44e-09 | 167 |
mesoderm | 4.63e-07 | 315 |
mesoderm-derived structure | 4.63e-07 | 315 |
presumptive mesoderm | 4.63e-07 | 315 |
lateral plate mesoderm | 9.91e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.07e-08 | 1 |