FFCP PHASE1:Hg19::chr17:4638647..4638678,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:4638647..4638678,-
|short_description=p@chr17:4638647..4638678,-
|description=CAGE_peak_at_chr17:4638647..4638678,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:4638647..4638678,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr17:4638647..4638678,- | |||
|id=chr17:4638647..4638678,- | |||
|ontology_enrichment_celltype=CL:0000766!1.91e-39!76;CL:0002057!1.44e-37!42;CL:0000839!1.01e-34!70;CL:0000860!5.08e-34!45;CL:0000557!5.79e-34!71;CL:0002194!3.86e-33!63;CL:0000576!3.86e-33!63;CL:0000040!3.86e-33!63;CL:0000559!3.86e-33!63;CL:0002009!1.41e-31!65;CL:0000763!1.01e-24!112;CL:0000049!1.01e-24!112;CL:0000738!5.70e-19!140;CL:0002031!4.83e-14!124;CL:0002087!1.80e-13!119;CL:0002032!2.73e-12!165;CL:0000837!2.73e-12!165;CL:0000037!2.91e-12!172;CL:0000566!2.91e-12!172;CL:0000988!1.46e-10!182;CL:0002393!5.19e-07!9;CL:0002397!5.19e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-58;33!CL:0002057;2.65e-58;33!CL:0000473;3.80e-44;39!CL:0000234;3.80e-44;39!CL:0000576;2.78e-36;48!CL:0000766;8.16e-28;69!CL:0000763;1.56e-16;100!CL:0000775;4.53e-13;3!CL:0002619;7.05e-13;3!CL:0000738;2.27e-10;136!CL:0002087;3.15e-09;104!CL:0000094;1.57e-08;8!CL:0000453;7.00e-08;5!CL:0000097;3.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.66e-58,72;CL:0000839,4.67e-49,66;CL:0000860,1.25e-48,42;CL:0002057,1.25e-48,42;CL:0000557,3.19e-48,67;CL:0000473,1.87e-45,48;CL:0000234,1.87e-45,48;CL:0002194,4.52e-45,59;CL:0000576,4.52e-45,59;CL:0000040,4.52e-45,59;CL:0000559,4.52e-45,59;CL:0000763,4.43e-44,108;CL:0000049,4.43e-44,108;CL:0002009,2.17e-43,61;CL:0000738,2.95e-33,136;CL:0002032,9.37e-27,161;CL:0000837,9.37e-27,161;CL:0000037,2.80e-25,168;CL:0002031,9.11e-24,120;CL:0000988,1.49e-23,177;CL:0002087,6.08e-20,115;CL:0000775,3.36e-13,3;CL:0002619,7.81e-13,3;CL:0000134,6.91e-09,354;CL:0000094,1.36e-08,8;CL:0002320,1.52e-08,361;CL:0000219,5.58e-08,386;CL:0000453,6.77e-08,5;CL:0000097,4.16e-07,5;CL:0002028,4.16e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.53e-39;42!CL:0000049;8.24e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.13e-28!80;UBERON:0001474!3.37e-27!86;UBERON:0004765!1.86e-25!101;UBERON:0001434!1.86e-25!101;UBERON:0002405!7.93e-25!115;UBERON:0002390!6.90e-24!102;UBERON:0003061!6.90e-24!102;UBERON:0002193!7.83e-24!112;UBERON:0002204!7.34e-11!167;UBERON:0000062!9.21e-09!511;UBERON:0003081!5.92e-08!216;UBERON:0000926!1.70e-07!448;UBERON:0004120!1.70e-07!448;UBERON:0006603!1.70e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.08e-41,76;UBERON:0001474,3.99e-38,82;UBERON:0002405,1.41e-37,93;UBERON:0004765,4.20e-34,90;UBERON:0002390,6.37e-33,98;UBERON:0003061,6.37e-33,98;UBERON:0002193,2.64e-31,108;UBERON:0001434,5.67e-30,100;UBERON:0002204,4.93e-15,167;UBERON:0003081,4.78e-12,203;UBERON:0002384,8.89e-09,371 | |||
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| ||
|short_description=p@chr17:4638647..4638678,- | |||
}} | }} |
Latest revision as of 18:03, 25 July 2015
Short description: | p@chr17:4638647..4638678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4638647..4638678, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.66e-58 | 72 |
myeloid lineage restricted progenitor cell | 4.67e-49 | 66 |
classical monocyte | 1.25e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-48 | 42 |
granulocyte monocyte progenitor cell | 3.19e-48 | 67 |
defensive cell | 1.87e-45 | 48 |
phagocyte | 1.87e-45 | 48 |
monopoietic cell | 4.52e-45 | 59 |
monocyte | 4.52e-45 | 59 |
monoblast | 4.52e-45 | 59 |
promonocyte | 4.52e-45 | 59 |
myeloid cell | 4.43e-44 | 108 |
common myeloid progenitor | 4.43e-44 | 108 |
macrophage dendritic cell progenitor | 2.17e-43 | 61 |
leukocyte | 2.95e-33 | 136 |
hematopoietic oligopotent progenitor cell | 9.37e-27 | 161 |
hematopoietic multipotent progenitor cell | 9.37e-27 | 161 |
hematopoietic stem cell | 2.80e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 9.11e-24 | 120 |
hematopoietic cell | 1.49e-23 | 177 |
nongranular leukocyte | 6.08e-20 | 115 |
neutrophil | 3.36e-13 | 3 |
adult endothelial progenitor cell | 7.81e-13 | 3 |
mesenchymal cell | 6.91e-09 | 354 |
granulocyte | 1.36e-08 | 8 |
connective tissue cell | 1.52e-08 | 361 |
motile cell | 5.58e-08 | 386 |
Langerhans cell | 6.77e-08 | 5 |
mast cell | 4.16e-07 | 5 |
basophil mast progenitor cell | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.08e-41 | 76 |
bone element | 3.99e-38 | 82 |
immune system | 1.41e-37 | 93 |
skeletal element | 4.20e-34 | 90 |
hematopoietic system | 6.37e-33 | 98 |
blood island | 6.37e-33 | 98 |
hemolymphoid system | 2.64e-31 | 108 |
skeletal system | 5.67e-30 | 100 |
musculoskeletal system | 4.93e-15 | 167 |
lateral plate mesoderm | 4.78e-12 | 203 |
connective tissue | 8.89e-09 | 371 |