FFCP PHASE1:Hg19::chr17:48261691..48261699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48261691..48261699,- | |||
|coexpression_cluster_id=C1051 | |coexpression_cluster_id=C1051 | ||
|description=CAGE_peak_at_chr17:48261691..48261699,- | |description=CAGE_peak_at_chr17:48261691..48261699,- | ||
|id=chr17:48261691..48261699,- | |id=chr17:48261691..48261699,- | ||
|ontology_enrichment_celltype=CL:0002569;2.47e-10;6!CL:0002570;1.49e-07;8!CL:0002334;3.19e-07;12!CL:0000134;5.75e-07;55 | |ontology_enrichment_celltype=CL:0000055!3.07e-29!180;CL:0000057!2.62e-21!75;CL:0000048!3.22e-11!430;CL:0000723!1.39e-10!436;CL:0000034!3.89e-10!444;CL:0000499!4.43e-08!27;CL:0002371!4.52e-08!591;CL:0002334!9.59e-08!12;CL:0002320!6.77e-07!365;CL:0000680!6.86e-07!57;CL:0000056!6.86e-07!57;CL:0000355!6.86e-07!57;CL:0002620!8.88e-07!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0002569;2.47e-10;6!CL:0002570;1.49e-07;8!CL:0002334;3.19e-07;12!CL:0000134;5.75e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.90e-12,76;CL:0002569,2.69e-10,6;CL:0000136,3.26e-09,15;CL:0002570,1.22e-07,8;CL:0002334,3.49e-07,12;CL:0002320,6.16e-07,361;CL:0000134,7.73e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003104;9.24e-13;7!UBERON:0009142;9.24e-13;7!UBERON:0003422;2.47e-10;6!UBERON:0002331;9.89e-09;10!UBERON:0001013;1.15e-07;14!UBERON:0003688;3.56e-07;6!UBERON:0002358;3.56e-07;6!UBERON:0003684;3.56e-07;6!UBERON:0001178;3.56e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.37e-07!61;UBERON:0002036!1.37e-07!61;UBERON:0003082!1.37e-07!61;UBERON:0000914!3.59e-07!83;UBERON:0002329!3.59e-07!83;UBERON:0003077!3.59e-07!83;UBERON:0003059!3.59e-07!83;UBERON:0007282!3.59e-07!83;UBERON:0009618!3.59e-07!83;UBERON:0007285!3.59e-07!83;UBERON:0002384!3.91e-07!375;UBERON:0002385!4.31e-07!63;UBERON:0001015!4.31e-07!63;UBERON:0000383!4.31e-07!63;UBERON:0004290!9.19e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;9.24e-13;7!UBERON:0009142;9.24e-13;7!UBERON:0003422;2.47e-10;6!UBERON:0002331;9.89e-09;10!UBERON:0001013;1.15e-07;14!UBERON:0003688;3.56e-07;6!UBERON:0002358;3.56e-07;6!UBERON:0003684;3.56e-07;6!UBERON:0001178;3.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,2.69e-10,6;UBERON:0002331,1.05e-08,10;UBERON:0000358,1.05e-08,10;UBERON:0000307,1.05e-08,10;UBERON:0000091,1.05e-08,10;UBERON:0000087,1.05e-08,10;UBERON:0007010,1.05e-08,10;UBERON:0007806,1.05e-08,10;UBERON:0008780,1.05e-08,10;UBERON:0005728,1.05e-08,10;UBERON:0001013,8.30e-08,14;UBERON:0003688,3.69e-07,6;UBERON:0002358,3.69e-07,6;UBERON:0003684,3.69e-07,6;UBERON:0001178,3.69e-07,6;UBERON:0002384,5.81e-07,371 | |||
|phase1_expression=1.63510541343501,2.5692062866918,1.40954404095971,0,3.12872766099101,1.74467704820074,2.53299878168311,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0.487932798790507,0.369363174230364,0.408001382488506,1.56727360739044,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0.50133791063589,1.73815822752988,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,0.886413581652058,0.662045904066094,3.15520282823695,1.06400514659507,0.560677600142307,3.20246987189115,3.7000132262574,0.622422070799533,0.134710672069688,0,1.21085942115945,0,0,0,0,0.597794722207204,0,0,0,0,0.122834317311768,0,0,2.71993622206413,0,1.43723628363248,0,0.125118519871964,0,0.877955241761676,1.22595118319608,0.600952235626387,0.226864366320042,1.25572744982203,1.06778694409284,0.847727604638247,1.50045548042201,0.412210116953756,1.8034837803194,0.18611685633159,0.675105328965065,0.389748020644795,1.00973509697646,0.736399189138395,0.646584227275248,3.19508633264953,0.604512589365842,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,1.2347220339942,8.82052268313252,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.22001485746285,1.16344544182,0,4.22651376278,0.26593811658487,2.08014873822732,0,2.83698264046557,0.266422179016099,2.7165818795048,2.17048642156577,1.64648067356154,0,0,0,0,0,0.199945982364114,0,0,0,2.15662369942424,10.3375742250703,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,5.19927153827018,8.02930449587228,3.46945313074656,0.819989904948992,1.50473049863859,4.5481500811197,0,1.32845119707087,0.737476674166813,0.173767228936166,0.587403472388222,1.02943027143257,0,0,0,0.606255142892519,0,2.11673205330776,4.21783273291921,0.920771839728375,5.05188169979532,3.71603532841533,0,7.56013429374955,0,0.308419387605311,1.59805552781814,0.246381468041427,1.03850885836724,0.116210378459959,0,0,0,0.918515585316854,0.728364672026868,1.57349297951309,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.537101224341368,0.580066775656914,0.170453254832202,2.04773681987496,0,0.192190067365106,0,0,1.85938219718914,5.35180989612088,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.953150969619124,0.511795582622668,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.942499218765491,0.606547444719948,0,0,0,0.487426979262569,0,0.272999822815972,3.67654123079653,0,0,0.66343897524122,0,0,1.31178950409327,0,0,0,0.143411352204052,0.392996164052485,0,0,0.844430541190656,0.987884678879706,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,15.248975298677,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61569185248852,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,1.66441758450784,0,0,0,0.228840068396924,0.302461847526478,1.5543720058278,0.147855149989634,0.159296767163702,0,0.776314784381297,0.829412415681711,0.797525143673985,0.521745061811734,5.25901631490265,0,0,0.727394636810238,1.18151612746737,0,1.19428766609585,0,2.06037423109676,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,3.81605220784102,0,0,8.11154670488573,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0.596748666348824,0.0752103283492573,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.799072156691,13.5999078056559,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,2.5359343655004,1.0195626881269,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,7.81189538150178,0.462175628631418,9.95041092884715,0,0,0,0,0,0,0,0,0,0,0,0,2.85677317756488,0,0.0620747142958579,0,0,1.61693751166575,0,0.684466602170562,0,0.0717222053926763,2.66128285236811,0,0.106727345877715,0,0,32.8497319364836,0.1222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| ||
|short_description=p@chr17:48261691..48261699,- | |short_description=p@chr17:48261691..48261699,- | ||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48261691..48261699, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261691..48261699, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.90e-12 | 76 |
mesenchymal stem cell of umbilical cord | 2.69e-10 | 6 |
fat cell | 3.26e-09 | 15 |
mesenchymal stem cell of adipose | 1.22e-07 | 8 |
preadipocyte | 3.49e-07 | 12 |
connective tissue cell | 6.16e-07 | 361 |
mesenchymal cell | 7.73e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 2.69e-10 | 6 |
umbilical cord | 1.05e-08 | 10 |
blastocyst | 1.05e-08 | 10 |
blastula | 1.05e-08 | 10 |
bilaminar disc | 1.05e-08 | 10 |
inner cell mass | 1.05e-08 | 10 |
cleaving embryo | 1.05e-08 | 10 |
connecting stalk | 1.05e-08 | 10 |
inner cell mass derived epiblast | 1.05e-08 | 10 |
extraembryonic mesoderm | 1.05e-08 | 10 |
adipose tissue | 8.30e-08 | 14 |
omentum | 3.69e-07 | 6 |
peritoneum | 3.69e-07 | 6 |
abdominal cavity | 3.69e-07 | 6 |
visceral peritoneum | 3.69e-07 | 6 |
connective tissue | 5.81e-07 | 371 |