FFCP PHASE1:Hg19::chr17:72734505..72734521,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:72734505..72734521,- | |||
|description=CAGE_peak_at_chr17:72734505..72734521,- | |description=CAGE_peak_at_chr17:72734505..72734521,- | ||
|id=chr17:72734505..72734521,- | |id=chr17:72734505..72734521,- | ||
|ontology_enrichment_celltype=CL:0000037!3.30e-53!172;CL:0000566!3.30e-53!172;CL:0000988!8.86e-53!182;CL:0002032!3.19e-50!165;CL:0000837!3.19e-50!165;CL:0000738!5.30e-35!140;CL:0000838!1.48e-34!52;CL:0000542!1.18e-33!53;CL:0000051!1.18e-33!53;CL:0002031!1.07e-31!124;CL:0000084!3.27e-30!25;CL:0000827!3.27e-30!25;CL:0002087!3.82e-29!119;CL:0000791!1.72e-25!18;CL:0000789!1.72e-25!18;CL:0002420!1.72e-25!18;CL:0002419!1.72e-25!18;CL:0000790!1.72e-25!18;CL:0000763!5.45e-19!112;CL:0000049!5.45e-19!112;CL:0000625!1.56e-17!11;CL:0000134!3.95e-12!358;CL:0002320!1.88e-11!365;CL:0000219!4.14e-09!390;CL:0002393!2.39e-08!9;CL:0002397!2.39e-08!9;CL:0000766!2.72e-08!76;CL:0000624!2.79e-08!6;CL:0000236!3.17e-07!14;CL:0000034!3.54e-07!444;CL:0000048!8.53e-07!430 | |ontology_enrichment_celltype=CL:0000037!3.30e-53!172;CL:0000566!3.30e-53!172;CL:0000988!8.86e-53!182;CL:0002032!3.19e-50!165;CL:0000837!3.19e-50!165;CL:0000738!5.30e-35!140;CL:0000838!1.48e-34!52;CL:0000542!1.18e-33!53;CL:0000051!1.18e-33!53;CL:0002031!1.07e-31!124;CL:0000084!3.27e-30!25;CL:0000827!3.27e-30!25;CL:0002087!3.82e-29!119;CL:0000791!1.72e-25!18;CL:0000789!1.72e-25!18;CL:0002420!1.72e-25!18;CL:0002419!1.72e-25!18;CL:0000790!1.72e-25!18;CL:0000763!5.45e-19!112;CL:0000049!5.45e-19!112;CL:0000625!1.56e-17!11;CL:0000134!3.95e-12!358;CL:0002320!1.88e-11!365;CL:0000219!4.14e-09!390;CL:0002393!2.39e-08!9;CL:0002397!2.39e-08!9;CL:0000766!2.72e-08!76;CL:0000624!2.79e-08!6;CL:0000236!3.17e-07!14;CL:0000034!3.54e-07!444;CL:0000048!8.53e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.60e-32;11!CL:0000791;4.14e-27;18!CL:0000789;4.14e-27;18!CL:0002419;4.14e-27;18!CL:0000084;4.11e-22;25!CL:0000542;3.43e-13;53!CL:0000097;4.69e-13;5!CL:0000875;5.18e-12;3!CL:0002396;5.18e-12;3!CL:0000623;7.69e-12;3!CL:0000163;2.97e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.21e-33,11;CL:0000791,1.34e-27,18;CL:0000789,1.34e-27,18;CL:0002420,1.34e-27,18;CL:0002419,1.34e-27,18;CL:0000790,1.34e-27,18;CL:0000084,2.28e-22,25;CL:0000827,2.28e-22,25;CL:0000838,4.79e-21,52;CL:0000542,1.46e-20,53;CL:0000051,1.46e-20,53;CL:0000037,2.33e-20,168;CL:0000988,6.74e-19,177;CL:0000738,9.76e-19,136;CL:0002032,1.06e-18,161;CL:0000837,1.06e-18,161;CL:0002031,6.32e-16,120;CL:0000097,5.94e-13,5;CL:0002028,5.94e-13,5;CL:0000623,3.00e-12,3;CL:0000825,3.00e-12,3;CL:0000875,4.74e-12,3;CL:0002396,4.74e-12,3;CL:0002087,2.62e-11,115;CL:0000893,3.51e-08,2;CL:0002489,3.51e-08,2;CL:0000809,3.51e-08,2;CL:0000808,3.51e-08,2;CL:0000894,3.51e-08,2;CL:0000806,3.51e-08,2;CL:0000807,3.51e-08,2;CL:0000805,3.51e-08,2;CL:0002425,3.51e-08,2;CL:0000163,3.37e-07,9;CL:0002393,5.64e-07,9;CL:0002397,5.64e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;4.14e-27;18!CL:0000051;3.43e-13;53!CL:0002425;3.37e-08;2 | |||
|ontology_enrichment_disease=DOID:1240!6.93e-19!39;DOID:2531!2.37e-16!51;DOID:0060083!2.37e-16!51;DOID:8692!2.57e-14!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.03e-17!102;UBERON:0003061!6.03e-17!102;UBERON:0000178!1.03e-15!15;UBERON:0000179!1.03e-15!15;UBERON:0000463!1.03e-15!15;UBERON:0002193!4.53e-15!112;UBERON:0002384!1.55e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-15;15!UBERON:0000179;1.03e-15;15!UBERON:0000463;1.03e-15;15!UBERON:0002390;5.80e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.05e-15,15;UBERON:0000179,1.05e-15,15;UBERON:0000463,1.05e-15,15;UBERON:0002390,8.67e-11,98;UBERON:0003061,8.67e-11,98;UBERON:0002193,2.28e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.393553906568396,1.57345710739562,0.767658796194425,0.464448369948228,0,0,0,0,0,2.64240395401362,0.553995408531877,0,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0.818718450173537,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,2.32380814943136,0.850417199860174,0.838634582033504,0.22465726229299,0,0.16072558669708,3.42015292489498,1.79025009479181,1.27864907635244,0,0.546138611262131,0.889509253863555,0.426730222566507,1.20118796110804,1.14950487990897,1.32208974556972,0.954053754535364,0,0,0.382273228125229,11.8954195721123,0.560508562981536,1.31692042387539,0.196709770113833,0.393010762749165,0.822405995998037,2.17342444007882,0.32592226663359,2.36723902867367,0,1.11410456885174,0.883817722424512,0.443067789167242,0.812411591295047,1.0247305578054,1.43065282315866,1.64437904603676,0.552700035571697,2.02862160014537,0.593146252648242,0.535081656179426,0,0.566546713487831,1.53288197440768,0.68725489096526,1.26509846009751,1.59282707162048,1.30216690771284,2.85135613334512,0.602300476311091,2.43174561193395,3.74792179657038,1.89421801635213,1.64225599384209,1.41124720257313,1.87208137048455,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40877494421162,6.42717158176393,2.16179930125442,4.4184851699233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,1.97030760201927,2.80315847317372,1.54011643535698,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,2.29391162142713,2.27858874869665,1.90585420366231,2.46817363851717,3.24236655596359,3.24018862342869,2.37937552888281,0,0,0,0,0,0.355709216742071,0.318852545457645,0.59873811429845,0.191505370132367,0.211673582723883,0.324621940274555,0.842391534340376,1.36940807419915,0.156679895773023,2.50634477090067,0.338583555603207,0.963528450622197,0.605399121573143,0.851692475380653,0.687010689511529,0.307240764308458,0,0,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.434523000071005,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.393553906568396,1.57345710739562,0.767658796194425,0.464448369948228,0,0,0,0,0,2.64240395401362,0.553995408531877,0,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0.818718450173537,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,2.32380814943136,0.850417199860174,0.838634582033504,0.22465726229299,0,0.16072558669708,3.42015292489498,1.79025009479181,1.27864907635244,0,0.546138611262131,0.889509253863555,0.426730222566507,1.20118796110804,1.14950487990897,1.32208974556972,0.954053754535364,0,0,0.382273228125229,11.8954195721123,0.560508562981536,1.31692042387539,0.196709770113833,0.393010762749165,0.822405995998037,2.17342444007882,0.32592226663359,2.36723902867367,0,1.11410456885174,0.883817722424512,0.443067789167242,0.812411591295047,1.0247305578054,1.43065282315866,1.64437904603676,0.552700035571697,2.02862160014537,0.593146252648242,0.535081656179426,0,0.566546713487831,1.53288197440768,0.68725489096526,1.26509846009751,1.59282707162048,1.30216690771284,2.85135613334512,0.602300476311091,2.43174561193395,3.74792179657038,1.89421801635213,1.64225599384209,1.41124720257313,1.87208137048455,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40877494421162,6.42717158176393,2.16179930125442,4.4184851699233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,1.97030760201927,2.80315847317372,1.54011643535698,0,0,0,0,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,2.29391162142713,2.27858874869665,1.90585420366231,2.46817363851717,3.24236655596359,3.24018862342869,2.37937552888281,0,0,0,0,0,0.355709216742071,0.318852545457645,0.59873811429845,0.191505370132367,0.211673582723883,0.324621940274555,0.842391534340376,1.36940807419915,0.156679895773023,2.50634477090067,0.338583555603207,0.963528450622197,0.605399121573143,0.851692475380653,0.687010689511529,0.307240764308458,0,0,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.434523000071005,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr17:72734505..72734521,- | |short_description=p@chr17:72734505..72734521,- | ||
}} | }} |
Latest revision as of 20:55, 25 July 2015
Short description: | p@chr17:72734505..72734521, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:72734505..72734521, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.05e-15 | 15 |
haemolymphatic fluid | 1.05e-15 | 15 |
organism substance | 1.05e-15 | 15 |
hematopoietic system | 8.67e-11 | 98 |
blood island | 8.67e-11 | 98 |
hemolymphoid system | 2.28e-09 | 108 |