FFCP PHASE1:Hg19::chr17:7960200..7960204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002gjx.1_5end | |association_with_transcript=0bp_to_uc002gjx.1_5end | ||
|cluster_id=chr17:7960200..7960204,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_1_at_uc002gjx.1_5end | |description=CAGE_peak_1_at_uc002gjx.1_5end | ||
|id=chr17:7960200..7960204,+ | |id=chr17:7960200..7960204,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.07e-09;12!CL:0002231;3.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.61e-10,12;CL:0002231,3.18e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.31e-11;30!UBERON:0004161;6.32e-11;11!UBERON:0009497;3.38e-09;13!UBERON:0006595;9.44e-09;86!UBERON:0009847;2.01e-07;3!UBERON:0003353;2.01e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.65e-16!129;UBERON:0004185!1.65e-16!129;UBERON:0004119!3.05e-16!169;UBERON:0000925!3.05e-16!169;UBERON:0006595!3.05e-16!169;UBERON:0001007!3.99e-15!155;UBERON:0001555!3.99e-15!155;UBERON:0007026!3.99e-15!155;UBERON:0005911!4.05e-13!82;UBERON:0000077!4.06e-13!130;UBERON:0003929!2.93e-11!54;UBERON:0005177!7.90e-10!107;UBERON:0009497!2.16e-09!25;UBERON:0000015!2.16e-09!25;UBERON:0002423!2.16e-09!25;UBERON:0006235!2.16e-09!25;UBERON:0004161!2.16e-09!25;UBERON:0000466!2.58e-09!126;UBERON:0009569!6.03e-09!113;UBERON:0001041!1.01e-08!98;UBERON:0008835!9.99e-08!22;UBERON:0003894!9.99e-08!22;UBERON:0005172!1.76e-07!55;UBERON:0005173!1.76e-07!55;UBERON:0005057!2.00e-07!26;UBERON:0009854!2.71e-07!23;UBERON:0000481!4.53e-07!347;UBERON:0002530!7.64e-07!59;UBERON:0003104!8.15e-07!238;UBERON:0009142!8.15e-07!238 | |ontology_enrichment_uberon=UBERON:0004921!1.65e-16!129;UBERON:0004185!1.65e-16!129;UBERON:0004119!3.05e-16!169;UBERON:0000925!3.05e-16!169;UBERON:0006595!3.05e-16!169;UBERON:0001007!3.99e-15!155;UBERON:0001555!3.99e-15!155;UBERON:0007026!3.99e-15!155;UBERON:0005911!4.05e-13!82;UBERON:0000077!4.06e-13!130;UBERON:0003929!2.93e-11!54;UBERON:0005177!7.90e-10!107;UBERON:0009497!2.16e-09!25;UBERON:0000015!2.16e-09!25;UBERON:0002423!2.16e-09!25;UBERON:0006235!2.16e-09!25;UBERON:0004161!2.16e-09!25;UBERON:0000466!2.58e-09!126;UBERON:0009569!6.03e-09!113;UBERON:0001041!1.01e-08!98;UBERON:0008835!9.99e-08!22;UBERON:0003894!9.99e-08!22;UBERON:0005172!1.76e-07!55;UBERON:0005173!1.76e-07!55;UBERON:0005057!2.00e-07!26;UBERON:0009854!2.71e-07!23;UBERON:0000481!4.53e-07!347;UBERON:0002530!7.64e-07!59;UBERON:0003104!8.15e-07!238;UBERON:0009142!8.15e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.53e-12;22!UBERON:0002107;1.96e-11;19!UBERON:0006925;1.96e-11;19!UBERON:0002108;3.81e-09;4!UBERON:0000160;6.25e-09;17!UBERON:0002423;1.84e-08;25!UBERON:0002365;3.34e-08;31!UBERON:0002330;3.34e-08;31!UBERON:0000077;1.58e-07;27!UBERON:0003101;2.94e-07;22!UBERON:0000079;2.94e-07;22!UBERON:0002367;4.09e-07;11!UBERON:0010147;4.09e-07;11!UBERON:0004921;9.46e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,9.27e-23,118;UBERON:0001007,2.05e-17,145;UBERON:0001555,2.05e-17,145;UBERON:0007026,2.05e-17,145;UBERON:0004119,1.38e-16,160;UBERON:0000925,1.38e-16,160;UBERON:0006595,1.38e-16,160;UBERON:0005911,1.01e-14,82;UBERON:0005409,4.54e-13,25;UBERON:0003929,3.40e-12,54;UBERON:0003064,4.26e-12,28;UBERON:0002107,1.78e-11,19;UBERON:0006925,1.78e-11,19;UBERON:0008836,1.78e-11,19;UBERON:0000162,1.95e-11,14;UBERON:0001353,1.95e-11,14;UBERON:0000163,1.95e-11,14;UBERON:0006866,1.95e-11,14;UBERON:0000164,1.95e-11,14;UBERON:0000931,1.95e-11,14;UBERON:0001046,3.59e-11,19;UBERON:0005177,4.19e-11,101;UBERON:0004122,1.23e-10,15;UBERON:0002100,3.60e-10,199;UBERON:0011216,4.91e-10,223;UBERON:0008835,8.82e-10,22;UBERON:0003894,8.82e-10,22;UBERON:0009569,1.13e-09,112;UBERON:0009854,2.58e-09,23;UBERON:0002530,3.13e-09,59;UBERON:0002108,4.03e-09,4;UBERON:0005153,4.56e-09,37;UBERON:0001041,5.66e-09,87;UBERON:0000160,6.68e-09,17;UBERON:0002365,1.00e-08,31;UBERON:0002330,1.00e-08,31;UBERON:0007499,1.71e-08,25;UBERON:0009497,1.71e-08,25;UBERON:0000015,1.71e-08,25;UBERON:0002423,1.71e-08,25;UBERON:0006235,1.71e-08,25;UBERON:0004161,1.71e-08,25;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0009856,3.95e-08,26;UBERON:0001008,7.64e-08,48;UBERON:0002417,1.96e-07,60;UBERON:0000916,1.96e-07,60;UBERON:0003101,2.98e-07,22;UBERON:0000079,2.98e-07,22;UBERON:0002367,4.12e-07,11;UBERON:0010147,4.12e-07,11;UBERON:0009846,4.12e-07,11;UBERON:0003353,4.12e-07,11;UBERON:0004902,4.12e-07,11;UBERON:0003820,4.12e-07,11;UBERON:0009847,4.12e-07,11;UBERON:0000077,5.97e-07,29;UBERON:0005157,8.29e-07,47 | |||
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| ||
|short_description=p1@uc002gjx.1 | |short_description=p1@uc002gjx.1 | ||
}} | }} |
Latest revision as of 22:46, 25 July 2015
Short description: | p1@uc002gjx.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002gjx.1_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 0bp_to_uc002gjx.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.61e-10 | 12 |
epithelial cell of prostate | 3.18e-07 | 3 |