FFCP PHASE1:Hg19::chr19:13948014..13948028,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13948014..13948028,+ | |||
|coexpression_cluster_id=C654 | |||
|description=CAGE_peak_at_chr19:13948014..13948028,+ | |description=CAGE_peak_at_chr19:13948014..13948028,+ | ||
|id=chr19:13948014..13948028,+ | |id=chr19:13948014..13948028,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.17e-46!140;CL:0000037!2.90e-45!172;CL:0000566!2.90e-45!172;CL:0002032!3.59e-42!165;CL:0000837!3.59e-42!165;CL:0000988!2.04e-41!182;CL:0002031!2.18e-37!124;CL:0002087!9.22e-34!119;CL:0000766!1.14e-32!76;CL:0002057!4.36e-31!42;CL:0000763!2.94e-29!112;CL:0000049!2.94e-29!112;CL:0000860!2.61e-28!45;CL:0000557!5.21e-26!71;CL:0000839!1.77e-23!70;CL:0002009!9.50e-23!65;CL:0002194!8.77e-21!63;CL:0000576!8.77e-21!63;CL:0000040!8.77e-21!63;CL:0000559!8.77e-21!63;CL:0000134!3.59e-14!358;CL:0002320!1.90e-13!365;CL:0000219!2.25e-12!390;CL:0000838!9.02e-12!52;CL:0000542!2.03e-11!53;CL:0000051!2.03e-11!53;CL:0000094!3.61e-11!8;CL:0000791!1.95e-09!18;CL:0000789!1.95e-09!18;CL:0002420!1.95e-09!18;CL:0002419!1.95e-09!18;CL:0000790!1.95e-09!18;CL:0000048!2.28e-09!430;CL:0000723!6.27e-09!436;CL:0000034!7.12e-09!444;CL:0000084!1.17e-08!25;CL:0000827!1.17e-08!25;CL:0002393!1.35e-08!9;CL:0002397!1.35e-08!9;CL:0000081!1.08e-07!11;CL:0000624!1.47e-07!6;CL:0000775!8.54e-07!3;CL:0000623!9.34e-07!3;CL:0000825!9.34e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.17e-46!140;CL:0000037!2.90e-45!172;CL:0000566!2.90e-45!172;CL:0002032!3.59e-42!165;CL:0000837!3.59e-42!165;CL:0000988!2.04e-41!182;CL:0002031!2.18e-37!124;CL:0002087!9.22e-34!119;CL:0000766!1.14e-32!76;CL:0002057!4.36e-31!42;CL:0000763!2.94e-29!112;CL:0000049!2.94e-29!112;CL:0000860!2.61e-28!45;CL:0000557!5.21e-26!71;CL:0000839!1.77e-23!70;CL:0002009!9.50e-23!65;CL:0002194!8.77e-21!63;CL:0000576!8.77e-21!63;CL:0000040!8.77e-21!63;CL:0000559!8.77e-21!63;CL:0000134!3.59e-14!358;CL:0002320!1.90e-13!365;CL:0000219!2.25e-12!390;CL:0000838!9.02e-12!52;CL:0000542!2.03e-11!53;CL:0000051!2.03e-11!53;CL:0000094!3.61e-11!8;CL:0000791!1.95e-09!18;CL:0000789!1.95e-09!18;CL:0002420!1.95e-09!18;CL:0002419!1.95e-09!18;CL:0000790!1.95e-09!18;CL:0000048!2.28e-09!430;CL:0000723!6.27e-09!436;CL:0000034!7.12e-09!444;CL:0000084!1.17e-08!25;CL:0000827!1.17e-08!25;CL:0002393!1.35e-08!9;CL:0002397!1.35e-08!9;CL:0000081!1.08e-07!11;CL:0000624!1.47e-07!6;CL:0000775!8.54e-07!3;CL:0000623!9.34e-07!3;CL:0000825!9.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.78e-30;8!CL:0000081;1.43e-21;11!CL:0000775;3.55e-21;3!CL:0000623;4.64e-21;3!CL:0000771;1.10e-14;2!CL:0000791;1.87e-12;18!CL:0000789;1.87e-12;18!CL:0002419;1.87e-12;18!CL:0000624;2.70e-10;6!CL:0002393;2.70e-10;6!CL:0002397;2.70e-10;6!CL:0000084;8.11e-09;25!CL:0000766;1.28e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,8.84e-30,8;CL:0000738,5.60e-25,136;CL:0000081,1.57e-21,11;CL:0000775,3.55e-21,3;CL:0000037,3.74e-21,168;CL:0000623,4.97e-21,3;CL:0000825,4.97e-21,3;CL:0002032,2.37e-20,161;CL:0000837,2.37e-20,161;CL:0000988,7.74e-20,177;CL:0000771,1.03e-14,2;CL:0000766,1.07e-14,72;CL:0002031,1.28e-13,120;CL:0002087,1.33e-12,115;CL:0000791,1.80e-12,18;CL:0000789,1.80e-12,18;CL:0002420,1.80e-12,18;CL:0002419,1.80e-12,18;CL:0000790,1.80e-12,18;CL:0000838,8.04e-11,52;CL:0000542,1.39e-10,53;CL:0000051,1.39e-10,53;CL:0000763,2.25e-10,108;CL:0000049,2.25e-10,108;CL:0000624,2.66e-10,6;CL:0000084,7.88e-09,25;CL:0000827,7.88e-09,25;CL:0000134,2.32e-08,354;CL:0002320,4.23e-08,361;CL:0000219,3.55e-07,386;CL:0002393,4.60e-07,9;CL:0002397,4.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.87e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.55e-32!102;UBERON:0003061!5.55e-32!102;UBERON:0002193!3.62e-30!112;UBERON:0002371!2.71e-24!80;UBERON:0001474!1.05e-21!86;UBERON:0002405!1.98e-18!115;UBERON:0004765!1.25e-16!101;UBERON:0001434!1.25e-16!101;UBERON:0002384!1.83e-12!375;UBERON:0003081!7.05e-10!216;UBERON:0000178!4.53e-08!15;UBERON:0000179!4.53e-08!15;UBERON:0000463!4.53e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.64e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,1.18009283054671,0,0.464448369948228,0,0,0,0,0,0.293600439334847,2.76997704265939,1.40381113229099,2.38711957787437,0.223915474239924,0,0,0.145398238779565,0,0.727752183563449,0.464858073811369,1.23350366406548,0.619412741790207,0,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0.898893937780338,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,1.08594422352558,0,0,0.949387162322653,0,0,0.209658645508376,0.561643155732475,0.150176892841506,0.32145117339416,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,0,0,1.57367816091066,2.35806457649499,2.05601498999509,0.501559486172034,0,0,1.94826728407911,0.445641827540694,0.883817722424512,0.886135578334485,0.541607727530031,0.640456598628376,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.339928028092699,0.383220493601921,0.34362744548263,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,2.62088766192152,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,1.65862492432618,2.16179930125442,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,6.90008239550455,6.03212270514817,0,0,0,0,0,5.99205619157746,8.97484377612075,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0.822724546172388,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,1.05836791361941,0,0,0,0.156679895773023,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,1.18009283054671,0,0.464448369948228,0,0,0,0,0,0.293600439334847,2.76997704265939,1.40381113229099,2.38711957787437,0.223915474239924,0,0,0.145398238779565,0,0.727752183563449,0.464858073811369,1.23350366406548,0.619412741790207,0,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0.898893937780338,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,1.08594422352558,0,0,0.949387162322653,0,0,0.209658645508376,0.561643155732475,0.150176892841506,0.32145117339416,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,0,0,1.57367816091066,2.35806457649499,2.05601498999509,0.501559486172034,0,0,1.94826728407911,0.445641827540694,0.883817722424512,0.886135578334485,0.541607727530031,0.640456598628376,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.339928028092699,0.383220493601921,0.34362744548263,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,2.62088766192152,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,1.65862492432618,2.16179930125442,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,6.90008239550455,6.03212270514817,0,0,0,0,0,5.99205619157746,8.97484377612075,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.714695326373367,0.822724546172388,1.94541993357815,2.16012574895246,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,1.05836791361941,0,0,0,0.156679895773023,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:13948014..13948028,+ | |short_description=p@chr19:13948014..13948028,+ | ||
}} | }} |
Latest revision as of 04:09, 26 July 2015
Short description: | p@chr19:13948014..13948028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13948014..13948028, + |
Coexpression cluster: | C654_Eosinophils_Neutrophils_Natural_CD8_CD4_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.64e-08 | 371 |