FFCP PHASE1:Hg19::chr19:41094612..41094654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41094612..41094654,+ | |||
|description=CAGE_peak_at_chr19:41094612..41094654,+ | |description=CAGE_peak_at_chr19:41094612..41094654,+ | ||
|id=chr19:41094612..41094654,+ | |id=chr19:41094612..41094654,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.59e-15!679;CL:0000004!2.59e-15!679;CL:0000255!2.59e-15!679;CL:0000012!1.08e-14!682;CL:0002371!1.43e-14!591;CL:0002139!8.97e-14!24;CL:0000144!1.00e-13!625;CL:0000066!1.79e-13!254;CL:0000063!2.28e-13!578;CL:0000115!2.99e-13!35;CL:0002078!5.63e-12!44;CL:0000213!1.70e-11!57;CL:0000215!1.70e-11!57;CL:1000449!5.51e-11!16;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:0000076!7.94e-11!62;CL:0000220!1.29e-10!246;CL:0002321!3.43e-10!248;CL:0000003!6.15e-10!722;CL:0002681!2.89e-09!13;CL:0002584!2.89e-09!13;CL:1000497!8.03e-09!18;CL:0002518!8.03e-09!18;CL:1000507!1.10e-08!12;CL:1000494!1.10e-08!12;CL:1000413!2.04e-07!9;CL:0000222!9.70e-07!119 | |ontology_enrichment_celltype=CL:0000548!2.59e-15!679;CL:0000004!2.59e-15!679;CL:0000255!2.59e-15!679;CL:0000012!1.08e-14!682;CL:0002371!1.43e-14!591;CL:0002139!8.97e-14!24;CL:0000144!1.00e-13!625;CL:0000066!1.79e-13!254;CL:0000063!2.28e-13!578;CL:0000115!2.99e-13!35;CL:0002078!5.63e-12!44;CL:0000213!1.70e-11!57;CL:0000215!1.70e-11!57;CL:1000449!5.51e-11!16;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:0000076!7.94e-11!62;CL:0000220!1.29e-10!246;CL:0002321!3.43e-10!248;CL:0000003!6.15e-10!722;CL:0002681!2.89e-09!13;CL:0002584!2.89e-09!13;CL:1000497!8.03e-09!18;CL:0002518!8.03e-09!18;CL:1000507!1.10e-08!12;CL:1000494!1.10e-08!12;CL:1000413!2.04e-07!9;CL:0000222!9.70e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.27e-23;24!CL:0000115;2.99e-20;36!CL:0000071;1.21e-19;18!CL:0002078;2.30e-15;45!CL:1000449;1.56e-13;15!CL:1000413;1.98e-12;9!CL:0000213;2.86e-12;58!CL:0000215;2.86e-12;58!CL:0002681;4.19e-12;12!CL:0002584;4.19e-12;12!CL:1000497;1.75e-11;17!CL:0002518;1.75e-11;17!CL:1000507;1.14e-09;10!CL:1000494;1.14e-09;10!CL:0000076;4.06e-09;63!CL:0002543;1.02e-08;6!CL:0002544;1.80e-08;6!CL:1000746;5.43e-08;7!CL:1000612;5.43e-08;7!CL:0002559;1.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,8.11e-24,45;CL:0002139,1.59e-23,24;CL:0000115,1.67e-23,36;CL:0000213,2.00e-20,58;CL:0000215,2.00e-20,58;CL:0000071,5.64e-20,18;CL:0002546,5.64e-20,18;CL:0000066,4.38e-17,253;CL:0000076,4.15e-15,63;CL:1000449,1.57e-13,15;CL:1000413,1.26e-12,9;CL:0002681,4.27e-12,12;CL:0002584,4.27e-12,12;CL:0002321,1.10e-11,250;CL:0000222,1.13e-11,121;CL:1000497,1.76e-11,17;CL:0002518,1.76e-11,17;CL:1000507,1.20e-09,10;CL:1000494,1.20e-09,10;CL:0002543,8.40e-09,6;CL:0002544,1.12e-08,6;CL:1000746,5.43e-08,7;CL:1000612,5.43e-08,7;CL:0002559,1.46e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.21e-19;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!5.51e-11!16;UBERON:0001285!5.51e-11!16;UBERON:0007684!5.51e-11!16;UBERON:0003220!5.51e-11!16;UBERON:0004208!5.51e-11!16;UBERON:0001986!6.54e-11!18;UBERON:0004638!6.54e-11!18;UBERON:0004852!6.54e-11!18;UBERON:0000080!7.18e-10!18;UBERON:0002120!7.18e-10!18;UBERON:0004875!7.18e-10!18;UBERON:0005721!7.18e-10!18;UBERON:0005754!7.18e-10!18;UBERON:0007297!7.18e-10!18;UBERON:0006555!7.87e-10!17;UBERON:0005103!7.87e-10!17;UBERON:0000083!7.87e-10!17;UBERON:0009201!7.87e-10!17;UBERON:0004819!7.87e-10!17;UBERON:0006553!7.87e-10!17;UBERON:0003074!7.87e-10!17;UBERON:0003060!7.87e-10!17;UBERON:0000487!1.29e-09!22;UBERON:0001225!2.89e-09!13;UBERON:0008987!2.89e-09!13;UBERON:0009773!1.10e-08!12;UBERON:0001231!1.10e-08!12;UBERON:0004810!1.10e-08!12;UBERON:0003887!2.39e-08!21;UBERON:0000058!2.47e-08!26;UBERON:0004876!4.93e-08!20;UBERON:0001851!1.40e-07!16;UBERON:0000353!1.95e-07!17;UBERON:0003915!2.04e-07!9;UBERON:0004700!2.04e-07!9;UBERON:0001917!2.04e-07!9;UBERON:0006914!2.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.21e-19;18!UBERON:0001986;1.21e-19;18!UBERON:0004852;1.21e-19;18!UBERON:0000487;4.79e-15;22!UBERON:0006555;1.56e-13;15!UBERON:0004819;1.56e-13;15!UBERON:0001285;1.56e-13;15!UBERON:0007684;1.56e-13;15!UBERON:0000490;9.17e-13;33!UBERON:0006914;1.37e-12;25!UBERON:0003915;1.98e-12;9!UBERON:0004700;1.98e-12;9!UBERON:0001917;1.98e-12;9!UBERON:0001225;4.19e-12;12!UBERON:0008987;4.19e-12;12!UBERON:0001851;1.15e-10;15!UBERON:0000353;1.15e-10;15!UBERON:0004211;1.14e-09;10!UBERON:0009773;1.14e-09;10!UBERON:0001231;1.14e-09;10!UBERON:0004810;1.14e-09;10!UBERON:0000074;5.43e-08;7!UBERON:0001229;5.43e-08;7!UBERON:0002073;1.92e-07;5!UBERON:0001473;2.14e-07;8!UBERON:0004536;2.14e-07;8!UBERON:0006558;2.14e-07;8!UBERON:0002113;4.48e-07;24!UBERON:0011143;4.48e-07;24!UBERON:0001638;5.63e-07;9!UBERON:0003920;5.63e-07;9!UBERON:0004582;5.63e-07;9 | |||
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| ||
|short_description=p@chr19:41094612..41094654,+ | |short_description=p@chr19:41094612..41094654,+ | ||
}} | }} |
Latest revision as of 07:54, 26 July 2015
Short description: | p@chr19:41094612..41094654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41094612..41094654, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 8.11e-24 | 45 |
endothelial cell of vascular tree | 1.59e-23 | 24 |
endothelial cell | 1.67e-23 | 36 |
lining cell | 2.00e-20 | 58 |
barrier cell | 2.00e-20 | 58 |
blood vessel endothelial cell | 5.64e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.64e-20 | 18 |
epithelial cell | 4.38e-17 | 253 |
squamous epithelial cell | 4.15e-15 | 63 |
epithelial cell of nephron | 1.57e-13 | 15 |
endothelial cell of artery | 1.26e-12 | 9 |
kidney cortical cell | 4.27e-12 | 12 |
renal cortical epithelial cell | 4.27e-12 | 12 |
embryonic cell | 1.10e-11 | 250 |
mesodermal cell | 1.13e-11 | 121 |
kidney cell | 1.76e-11 | 17 |
kidney epithelial cell | 1.76e-11 | 17 |
kidney tubule cell | 1.20e-09 | 10 |
nephron tubule epithelial cell | 1.20e-09 | 10 |
vein endothelial cell | 8.40e-09 | 6 |
aortic endothelial cell | 1.12e-08 | 6 |
glomerular cell | 5.43e-08 | 7 |
kidney corpuscule cell | 5.43e-08 | 7 |
hair follicle cell | 1.46e-07 | 5 |