FFCP PHASE1:Hg19::chr19:5680543..5680554,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=125988 | |EntrezGene=entrezgene:125988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=33702 | |HGNC=HGNC:33702 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q5XKP0 | |UniProt=uniprot:Q5XKP0 | ||
|association_with_transcript=356bp_to_ENST00000309324,NM_205767,uc002mch.1,uc002mci.1_5end | |association_with_transcript=356bp_to_ENST00000309324,NM_205767,uc002mch.1,uc002mci.1_5end | ||
|cluster_id=chr19:5680543..5680554,- | |||
|coexpression_cluster_id=C2480 | |coexpression_cluster_id=C2480 | ||
|description=CAGE_peak_2_at_C19orf70_5end | |description=CAGE_peak_2_at_C19orf70_5end | ||
Revision as of 17:39, 27 July 2015
| Short description: | p2@C19orf70 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_C19orf70_5end |
| Coexpression cluster: | C2480_Mesenchymal_liposarcoma_skeletal_Alveolar_heart_left_Osteoblast |
| Association with transcript: | 356bp_to_ENST00000309324, NM_205767, uc002mch.1, uc002mci.1_5end |
| EntrezGene: | 125988 |
| HGNC: | 33702 |
| UniProt: | Q5XKP0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@C19orf70 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 3.66e-17 | 58 |
| myoblast | 3.66e-17 | 58 |
| multi-potent skeletal muscle stem cell | 3.66e-17 | 58 |
| muscle cell | 1.87e-16 | 55 |
| smooth muscle cell | 2.08e-15 | 43 |
| smooth muscle myoblast | 2.08e-15 | 43 |
| mesodermal cell | 3.48e-15 | 121 |
| embryonic cell | 4.64e-14 | 250 |
| electrically responsive cell | 5.89e-14 | 61 |
| electrically active cell | 5.89e-14 | 61 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 7.05e-23 | 78 |
| multilaminar epithelium | 6.40e-21 | 83 |
| somite | 2.32e-20 | 71 |
| presomitic mesoderm | 2.32e-20 | 71 |
| presumptive segmental plate | 2.32e-20 | 71 |
| dermomyotome | 2.32e-20 | 71 |
| trunk paraxial mesoderm | 2.32e-20 | 71 |
| paraxial mesoderm | 2.74e-20 | 72 |
| presumptive paraxial mesoderm | 2.74e-20 | 72 |
| dense mesenchyme tissue | 2.97e-20 | 73 |
Showing 1 to 10 of 41 entries
