FFCP PHASE1:Hg19::chr19:6057689..6057699,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:6057689..6057699,+
|short_description=p@chr19:6057689..6057699,+
|description=CAGE_peak_at_chr19:6057689..6057699,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6057689..6057699,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr19:6057689..6057699,+ | |||
|id=chr19:6057689..6057699,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.09e-49!42;CL:0000860!4.12e-45!45;CL:0000766!2.44e-42!76;CL:0000557!2.72e-37!71;CL:0002009!1.54e-33!65;CL:0000763!1.93e-33!112;CL:0000049!1.93e-33!112;CL:0000839!1.37e-32!70;CL:0002194!1.72e-29!63;CL:0000576!1.72e-29!63;CL:0000040!1.72e-29!63;CL:0000559!1.72e-29!63;CL:0000738!5.57e-28!140;CL:0000037!7.12e-25!172;CL:0000566!7.12e-25!172;CL:0000988!6.58e-23!182;CL:0002032!9.60e-21!165;CL:0000837!9.60e-21!165;CL:0002031!3.69e-19!124;CL:0002087!2.41e-17!119;CL:0000134!2.90e-13!358;CL:0002320!9.04e-13!365;CL:0000767!3.01e-11!3;CL:0000219!4.92e-11!390;CL:0000094!1.45e-10!8;CL:0000842!6.49e-10!3;CL:0000048!1.37e-09!430;CL:0000723!2.76e-09!436;CL:0000034!6.81e-09!444;CL:0002393!7.85e-09!9;CL:0002397!7.85e-09!9;CL:0001014!6.46e-08!2;CL:0001016!6.46e-08!2;CL:0000081!1.47e-07!11;CL:0000224!1.56e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.96e-38;3!CL:0001014;5.95e-26;2!CL:0001016;5.95e-26;2!CL:0000094;1.40e-25;8!CL:0000081;1.06e-18;11!CL:0000860;1.31e-17;33!CL:0002057;1.31e-17;33!CL:0000576;1.26e-15;48!CL:0000766;3.79e-13;69!CL:0000473;5.12e-13;39!CL:0000234;5.12e-13;39!CL:0000453;5.56e-11;5!CL:0000840;2.66e-09;5!CL:0002393;3.71e-09;6!CL:0002397;3.71e-09;6!CL:0000771;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.84e-38,3;CL:0000766,3.44e-27,72;CL:0001014,9.87e-26,2;CL:0001016,9.87e-26,2;CL:0000094,1.32e-25,8;CL:0000763,6.07e-24,108;CL:0000049,6.07e-24,108;CL:0000860,8.62e-23,42;CL:0002057,8.62e-23,42;CL:0002009,9.60e-23,61;CL:0000738,1.69e-21,136;CL:0000557,1.26e-20,67;CL:0000473,7.92e-20,48;CL:0000234,7.92e-20,48;CL:0000081,1.01e-18,11;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0002194,1.13e-15,59;CL:0000576,1.13e-15,59;CL:0000040,1.13e-15,59;CL:0000559,1.13e-15,59;CL:0002032,1.48e-15,161;CL:0000837,1.48e-15,161;CL:0000839,6.23e-14,66;CL:0002031,5.28e-11,120;CL:0000453,6.80e-11,5;CL:0002087,1.86e-09,115;CL:0000840,3.14e-09,5;CL:0001029,3.14e-09,5;CL:0000771,1.05e-07,2;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.50e-37!102;UBERON:0003061!2.50e-37!102;UBERON:0002371!1.84e-34!80;UBERON:0002193!4.09e-33!112;UBERON:0001474!1.81e-31!86;UBERON:0004765!1.55e-25!101;UBERON:0001434!1.55e-25!101;UBERON:0002405!6.48e-23!115;UBERON:0003081!2.43e-14!216;UBERON:0002204!3.84e-13!167;UBERON:0002384!4.25e-12!375;UBERON:0000178!5.35e-07!15;UBERON:0000179!5.35e-07!15;UBERON:0000463!5.35e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-18,76;UBERON:0001474,1.16e-16,82;UBERON:0002390,1.70e-16,98;UBERON:0003061,1.70e-16,98;UBERON:0004765,4.41e-15,90;UBERON:0002193,7.58e-15,108;UBERON:0002405,1.47e-14,93;UBERON:0001434,1.87e-13,100;UBERON:0002204,1.59e-07,167;UBERON:0003081,3.35e-07,203;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,4.4896675761662,0,0,0,0,0,0.293600439334847,0,0,1.51907609501096,0,0,0,0.145398238779565,0,1.21292030593908,0.464858073811369,0,2.16794459626573,0,0,1.6553756092201,0.689491361473237,0,1.35426486594342,1.88242339542605,0.545812300115692,1.57306439111559,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,2.17188844705117,0,0,0.632924774881769,0.845021145247767,0.637812899895131,1.04829322754188,0.673971786878971,0.150176892841506,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72037132218685,1.53531759238885,4.4896675761662,0,0,0,0,0,0.293600439334847,0,0,1.51907609501096,0,0,0,0.145398238779565,0,1.21292030593908,0.464858073811369,0,2.16794459626573,0,0,1.6553756092201,0.689491361473237,0,1.35426486594342,1.88242339542605,0.545812300115692,1.57306439111559,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,2.17188844705117,0,0,0.632924774881769,0.845021145247767,0.637812899895131,1.04829322754188,0.673971786878971,0.150176892841506,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:6057689..6057699,+ | |||
}} | }} |
Latest revision as of 18:01, 27 July 2015
Short description: | p@chr19:6057689..6057699, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6057689..6057699, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-18 | 76 |
bone element | 1.16e-16 | 82 |
hematopoietic system | 1.70e-16 | 98 |
blood island | 1.70e-16 | 98 |
skeletal element | 4.41e-15 | 90 |
hemolymphoid system | 7.58e-15 | 108 |
immune system | 1.47e-14 | 93 |
skeletal system | 1.87e-13 | 100 |
musculoskeletal system | 1.59e-07 | 167 |
lateral plate mesoderm | 3.35e-07 | 203 |
connective tissue | 9.92e-07 | 371 |