FFCP PHASE1:Hg19::chr19:6584243..6584253,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6584243..6584253,- | |||
|coexpression_cluster_id=C1828 | |coexpression_cluster_id=C1828 | ||
|description=CAGE_peak_at_chr19:6584243..6584253,- | |description=CAGE_peak_at_chr19:6584243..6584253,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000542!1.43e-08!53;CL:0000051!1.43e-08!53;CL:0000988!7.66e-08!182;CL:0000838!1.79e-07!52;CL:0000785!5.96e-07!2;CL:0000955!5.96e-07!2;CL:0000818!5.96e-07!2;CL:0000954!5.96e-07!2;CL:0000816!5.96e-07!2 | |ontology_enrichment_celltype=CL:0000945!1.05e-09!24;CL:0000826!1.05e-09!24;CL:0000542!1.43e-08!53;CL:0000051!1.43e-08!53;CL:0000988!7.66e-08!182;CL:0000838!1.79e-07!52;CL:0000785!5.96e-07!2;CL:0000955!5.96e-07!2;CL:0000818!5.96e-07!2;CL:0000954!5.96e-07!2;CL:0000816!5.96e-07!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!1.01e-13!10;DOID:2531!2.72e-12!51;DOID:0060083!2.72e-12!51;DOID:14566!3.21e-11!239;DOID:162!7.10e-11!235;DOID:0050686!1.36e-07!137;DOID:74!8.71e-07!2;DOID:1240!8.85e-07!39 | |ontology_enrichment_disease=DOID:0060058!1.01e-13!10;DOID:2531!2.72e-12!51;DOID:0060083!2.72e-12!51;DOID:14566!3.21e-11!239;DOID:162!7.10e-11!235;DOID:0050686!1.36e-07!137;DOID:74!8.71e-07!2;DOID:1240!8.85e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:0060058;7.67e-11;10 | |ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:0060058;7.67e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,2.16e-26,1;DOID:3350,6.43e-14,2;DOID:0060058,8.06e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.50e-11!9 | |ontology_enrichment_uberon=UBERON:0001737!2.50e-11!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.76e-23;10!UBERON:0000178;1.24e-15;15!UBERON:0000179;1.24e-15;15!UBERON:0000463;1.24e-15;15!UBERON:0000478;4.92e-10;24!UBERON:0002390;9.27e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.76e-23;10!UBERON:0000178;1.24e-15;15!UBERON:0000179;1.24e-15;15!UBERON:0000463;1.24e-15;15!UBERON:0000478;4.92e-10;24!UBERON:0002390;9.27e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.13e-23,10;UBERON:0000358,5.13e-23,10;UBERON:0000307,5.13e-23,10;UBERON:0000091,5.13e-23,10;UBERON:0000087,5.13e-23,10;UBERON:0007010,5.13e-23,10;UBERON:0007806,5.13e-23,10;UBERON:0008780,5.13e-23,10;UBERON:0005728,5.13e-23,10;UBERON:0000178,1.31e-15,15;UBERON:0000179,1.31e-15,15;UBERON:0000463,1.31e-15,15;UBERON:0000478,5.07e-10,24 | |||
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| ||
|short_description=p@chr19:6584243..6584253,- | |short_description=p@chr19:6584243..6584253,- | ||
}} | }} |
Latest revision as of 18:12, 27 July 2015
Short description: | p@chr19:6584243..6584253, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6584243..6584253, - |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.13e-23 | 10 |
blastocyst | 5.13e-23 | 10 |
blastula | 5.13e-23 | 10 |
bilaminar disc | 5.13e-23 | 10 |
inner cell mass | 5.13e-23 | 10 |
cleaving embryo | 5.13e-23 | 10 |
connecting stalk | 5.13e-23 | 10 |
inner cell mass derived epiblast | 5.13e-23 | 10 |
extraembryonic mesoderm | 5.13e-23 | 10 |
blood | 1.31e-15 | 15 |
haemolymphatic fluid | 1.31e-15 | 15 |
organism substance | 1.31e-15 | 15 |
extraembryonic structure | 5.07e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.16e-26 | 1 |
mesenchymal cell neoplasm | 6.43e-14 | 2 |
lymphoma | 8.06e-11 | 10 |