FFCP PHASE1:Hg19::chr1:110160052..110160064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:110160052..110160064,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr1:110160052..110160064,- | |description=CAGE_peak_at_chr1:110160052..110160064,- | ||
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|ontology_enrichment_celltype=CL:0002057!4.33e-64!42;CL:0000860!3.64e-59!45;CL:0000766!2.27e-48!76;CL:0002009!2.59e-42!65;CL:0002194!2.65e-41!63;CL:0000576!2.65e-41!63;CL:0000040!2.65e-41!63;CL:0000559!2.65e-41!63;CL:0000557!6.03e-38!71;CL:0000839!2.91e-36!70;CL:0000763!8.18e-33!112;CL:0000049!8.18e-33!112;CL:0000738!3.29e-30!140;CL:0002087!2.81e-23!119;CL:0000037!2.47e-22!172;CL:0000566!2.47e-22!172;CL:0000988!1.90e-20!182;CL:0002032!7.33e-20!165;CL:0000837!7.33e-20!165;CL:0002031!5.24e-19!124;CL:0002393!1.01e-18!9;CL:0002397!1.01e-18!9;CL:0000134!4.58e-17!358;CL:0002320!1.92e-16!365;CL:0000219!8.73e-16!390;CL:0000094!2.44e-13!8;CL:0000048!1.21e-11!430;CL:0000034!1.69e-11!444;CL:0000723!2.82e-11!436;CL:0000081!1.87e-09!11;CL:0000842!3.58e-09!3;CL:0000063!2.07e-08!578;CL:0000771!2.72e-07!2;CL:0000224!5.85e-07!4 | |ontology_enrichment_celltype=CL:0002057!4.33e-64!42;CL:0000860!3.64e-59!45;CL:0000766!2.27e-48!76;CL:0002009!2.59e-42!65;CL:0002194!2.65e-41!63;CL:0000576!2.65e-41!63;CL:0000040!2.65e-41!63;CL:0000559!2.65e-41!63;CL:0000557!6.03e-38!71;CL:0000839!2.91e-36!70;CL:0000763!8.18e-33!112;CL:0000049!8.18e-33!112;CL:0000738!3.29e-30!140;CL:0002087!2.81e-23!119;CL:0000037!2.47e-22!172;CL:0000566!2.47e-22!172;CL:0000988!1.90e-20!182;CL:0002032!7.33e-20!165;CL:0000837!7.33e-20!165;CL:0002031!5.24e-19!124;CL:0002393!1.01e-18!9;CL:0002397!1.01e-18!9;CL:0000134!4.58e-17!358;CL:0002320!1.92e-16!365;CL:0000219!8.73e-16!390;CL:0000094!2.44e-13!8;CL:0000048!1.21e-11!430;CL:0000034!1.69e-11!444;CL:0000723!2.82e-11!436;CL:0000081!1.87e-09!11;CL:0000842!3.58e-09!3;CL:0000063!2.07e-08!578;CL:0000771!2.72e-07!2;CL:0000224!5.85e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.13e-42;8!CL:0000081;1.84e-30;11!CL:0000771;3.14e-28;2!CL:0000860;2.43e-19;33!CL:0002057;2.43e-19;33!CL:0000775;6.63e-19;3!CL:0000473;1.12e-14;39!CL:0000234;1.12e-14;39!CL:0000766;2.62e-13;69!CL:0000576;1.19e-09;48!CL:0002262;7.52e-08;2!CL:1000398;7.52e-08;2!CL:0000763;1.18e-07;100 | |ontology_enrichment_celltype_v019=CL:0000094;8.13e-42;8!CL:0000081;1.84e-30;11!CL:0000771;3.14e-28;2!CL:0000860;2.43e-19;33!CL:0002057;2.43e-19;33!CL:0000775;6.63e-19;3!CL:0000473;1.12e-14;39!CL:0000234;1.12e-14;39!CL:0000766;2.62e-13;69!CL:0000576;1.19e-09;48!CL:0002262;7.52e-08;2!CL:1000398;7.52e-08;2!CL:0000763;1.18e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.48e-42,8;CL:0000081,1.74e-30,11;CL:0000766,3.57e-29,72;CL:0000771,3.14e-28,2;CL:0000860,2.98e-19,42;CL:0002057,2.98e-19,42;CL:0000763,4.33e-19,108;CL:0000049,4.33e-19,108;CL:0000775,6.63e-19,3;CL:0000738,1.77e-17,136;CL:0000473,9.24e-17,48;CL:0000234,9.24e-17,48;CL:0000037,6.99e-14,168;CL:0002194,2.89e-13,59;CL:0000576,2.89e-13,59;CL:0000040,2.89e-13,59;CL:0000559,2.89e-13,59;CL:0000988,4.22e-13,177;CL:0002009,8.18e-13,61;CL:0002032,2.30e-12,161;CL:0000837,2.30e-12,161;CL:0000839,8.41e-12,66;CL:0000557,1.29e-11,67;CL:0002087,3.04e-08,115;CL:0002262,6.58e-08,2;CL:1000398,6.58e-08,2;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-13;42!CL:0000049;1.02e-07;108 | |ontology_enrichment_development_v019=CL:0002057;2.70e-13;42!CL:0000049;1.02e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-34!80;UBERON:0002390!2.19e-34!102;UBERON:0003061!2.19e-34!102;UBERON:0001474!1.37e-31!86;UBERON:0002193!2.45e-30!112;UBERON:0004765!3.86e-27!101;UBERON:0001434!3.86e-27!101;UBERON:0002405!9.01e-23!115;UBERON:0003081!9.76e-16!216;UBERON:0002384!1.35e-15!375;UBERON:0002204!1.34e-12!167 | |ontology_enrichment_uberon=UBERON:0002371!1.10e-34!80;UBERON:0002390!2.19e-34!102;UBERON:0003061!2.19e-34!102;UBERON:0001474!1.37e-31!86;UBERON:0002193!2.45e-30!112;UBERON:0004765!3.86e-27!101;UBERON:0001434!3.86e-27!101;UBERON:0002405!9.01e-23!115;UBERON:0003081!9.76e-16!216;UBERON:0002384!1.35e-15!375;UBERON:0002204!1.34e-12!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;7.52e-08;2!UBERON:0003497;7.52e-08;2!UBERON:0003909;7.52e-08;2!UBERON:0003835;7.52e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001281;7.52e-08;2!UBERON:0003497;7.52e-08;2!UBERON:0003909;7.52e-08;2!UBERON:0003835;7.52e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.60e-10,76;UBERON:0002390,7.87e-10,98;UBERON:0003061,7.87e-10,98;UBERON:0001474,2.23e-09,82;UBERON:0002193,7.75e-09,108;UBERON:0004765,1.75e-08,90;UBERON:0002405,3.46e-08,93;UBERON:0001281,6.58e-08,2;UBERON:0003497,6.58e-08,2;UBERON:0003909,6.58e-08,2;UBERON:0003835,6.58e-08,2;UBERON:0001434,1.46e-07,100 | |||
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| ||
|short_description=p@chr1:110160052..110160064,- | |short_description=p@chr1:110160052..110160064,- | ||
}} | }} |
Latest revision as of 19:23, 27 July 2015
Short description: | p@chr1:110160052..110160064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110160052..110160064, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.48e-42 | 8 |
blood cell | 1.74e-30 | 11 |
myeloid leukocyte | 3.57e-29 | 72 |
eosinophil | 3.14e-28 | 2 |
classical monocyte | 2.98e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-19 | 42 |
myeloid cell | 4.33e-19 | 108 |
common myeloid progenitor | 4.33e-19 | 108 |
neutrophil | 6.63e-19 | 3 |
leukocyte | 1.77e-17 | 136 |
defensive cell | 9.24e-17 | 48 |
phagocyte | 9.24e-17 | 48 |
hematopoietic stem cell | 6.99e-14 | 168 |
monopoietic cell | 2.89e-13 | 59 |
monocyte | 2.89e-13 | 59 |
monoblast | 2.89e-13 | 59 |
promonocyte | 2.89e-13 | 59 |
hematopoietic cell | 4.22e-13 | 177 |
macrophage dendritic cell progenitor | 8.18e-13 | 61 |
hematopoietic oligopotent progenitor cell | 2.30e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-12 | 161 |
myeloid lineage restricted progenitor cell | 8.41e-12 | 66 |
granulocyte monocyte progenitor cell | 1.29e-11 | 67 |
nongranular leukocyte | 3.04e-08 | 115 |
endothelial cell of sinusoid | 6.58e-08 | 2 |
endothelial cell of hepatic sinusoid | 6.58e-08 | 2 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.60e-10 | 76 |
hematopoietic system | 7.87e-10 | 98 |
blood island | 7.87e-10 | 98 |
bone element | 2.23e-09 | 82 |
hemolymphoid system | 7.75e-09 | 108 |
skeletal element | 1.75e-08 | 90 |
immune system | 3.46e-08 | 93 |
hepatic sinusoid | 6.58e-08 | 2 |
abdomen blood vessel | 6.58e-08 | 2 |
sinusoid | 6.58e-08 | 2 |
abdominal segment blood vessel | 6.58e-08 | 2 |
skeletal system | 1.46e-07 | 100 |