FFCP PHASE1:Hg19::chr1:113394964..113394983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:113394964..113394983,- | |||
|description=CAGE_peak_at_chr1:113394964..113394983,- | |description=CAGE_peak_at_chr1:113394964..113394983,- | ||
|id=chr1:113394964..113394983,- | |id=chr1:113394964..113394983,- | ||
|ontology_enrichment_celltype=CL:0000312!7.79e-17!5;CL:0000039!1.53e-16!7;CL:0000586!1.53e-16!7;CL:0002322!8.26e-16!5;CL:0002159!2.10e-15!13;CL:0000240!5.59e-14!6;CL:0000311!5.59e-14!6;CL:0000079!5.59e-14!6;CL:0000237!5.59e-14!6;CL:0000036!5.59e-14!6;CL:0000357!5.59e-14!6;CL:0000114!5.59e-14!6;CL:0002541!1.12e-11!3;CL:0002166!8.53e-11!3;CL:0000362!2.11e-10!8;CL:0002077!6.32e-10!33;CL:0000066!2.12e-08!254;CL:0000242!2.99e-08!2 | |ontology_enrichment_celltype=CL:0000312!7.79e-17!5;CL:0000039!1.53e-16!7;CL:0000586!1.53e-16!7;CL:0002322!8.26e-16!5;CL:0002159!2.10e-15!13;CL:0000240!5.59e-14!6;CL:0000311!5.59e-14!6;CL:0000079!5.59e-14!6;CL:0000237!5.59e-14!6;CL:0000036!5.59e-14!6;CL:0000357!5.59e-14!6;CL:0000114!5.59e-14!6;CL:0002541!1.12e-11!3;CL:0002166!8.53e-11!3;CL:0000362!2.11e-10!8;CL:0002077!6.32e-10!33;CL:0000066!2.12e-08!254;CL:0000242!2.99e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.03e-22;3!CL:0000123;2.41e-15;2!CL:0000242;2.41e-15;2!CL:0000312;1.33e-13;5!CL:0000240;2.00e-11;6!CL:0000311;2.00e-11;6!CL:0000079;2.00e-11;6!CL:0000237;2.00e-11;6!CL:0002178;1.79e-10;3!CL:0002251;1.09e-08;20!CL:0002159;2.36e-08;14!CL:0002563;7.99e-08;4!CL:0000362;8.94e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.69e-22,3;CL:0000242,2.08e-15,2;CL:0000312,1.22e-13,5;CL:0000240,1.86e-11,6;CL:0000311,1.86e-11,6;CL:0000079,1.86e-11,6;CL:0000237,1.86e-11,6;CL:0000036,1.86e-11,6;CL:0000357,1.86e-11,6;CL:0000114,1.86e-11,6;CL:0002178,1.62e-10,3;CL:0002251,1.11e-08,20;CL:0002159,2.21e-08,14;CL:0000362,8.53e-08,9;CL:0002563,8.57e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000357;2.00e-11;6!CL:0000114;2.00e-11;6 | |||
|ontology_enrichment_disease=DOID:3119!2.97e-11!14;DOID:0050687!1.40e-09!143;DOID:305!4.84e-09!106;DOID:3095!2.87e-08!22;DOID:2994!2.87e-08!22;DOID:3493!3.95e-08!2 | |ontology_enrichment_disease=DOID:3119!2.97e-11!14;DOID:0050687!1.40e-09!143;DOID:305!4.84e-09!106;DOID:3095!2.87e-08!22;DOID:2994!2.87e-08!22;DOID:3493!3.95e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.99e-15;2!DOID:299;3.05e-13;25!DOID:3119;1.18e-12;14!DOID:3111;7.84e-09;1!DOID:3603;7.84e-09;1!DOID:1799;3.17e-08;1!DOID:0050619;3.17e-08;1!DOID:10165;3.17e-08;1!DOID:1357;3.17e-08;1!DOID:1798;3.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.72e-15,2;DOID:299,3.05e-13,25;DOID:3119,1.20e-12,14;DOID:305,1.45e-10,106;DOID:3111,7.01e-09,1;DOID:3603,7.01e-09,1;DOID:0050687,2.23e-08,143;DOID:0050619,3.53e-08,1;DOID:1357,3.53e-08,1;DOID:1799,4.07e-08,1;DOID:10165,4.07e-08,1;DOID:1798,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.12e-11!3;UBERON:0000920!1.12e-11!3;UBERON:0001905!1.95e-08!2;UBERON:0002757!1.95e-08!2;UBERON:0010134!1.95e-08!2;UBERON:0002784!1.95e-08!2;UBERON:0005408!1.95e-08!2;UBERON:0001899!1.95e-08!2;UBERON:0001708!3.38e-08!4;UBERON:0001704!3.38e-08!4 | |ontology_enrichment_uberon=UBERON:0000476!1.12e-11!3;UBERON:0000920!1.12e-11!3;UBERON:0001905!1.95e-08!2;UBERON:0002757!1.95e-08!2;UBERON:0010134!1.95e-08!2;UBERON:0002784!1.95e-08!2;UBERON:0005408!1.95e-08!2;UBERON:0001899!1.95e-08!2;UBERON:0001708!3.38e-08!4;UBERON:0001704!3.38e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.03e-22;3!UBERON:0000920;2.03e-22;3!UBERON:0001905;1.08e-15;2!UBERON:0002757;1.08e-15;2!UBERON:0010134;1.08e-15;2!UBERON:0005408;1.08e-15;2!UBERON:0001899;1.08e-15;2!UBERON:0005409;1.17e-10;22!UBERON:0003929;1.29e-09;7!UBERON:0004913;1.77e-08;1!UBERON:0003703;1.77e-08;1!UBERON:0001174;1.77e-08;1!UBERON:0004914;1.77e-08;1!UBERON:0003350;1.79e-08;8!UBERON:0003296;2.75e-08;4!UBERON:0010133;2.75e-08;4!UBERON:0002784;2.75e-08;4!UBERON:0001764;3.17e-08;1!UBERON:0001825;3.17e-08;1!UBERON:0001052;3.67e-08;4!UBERON:0001242;7.99e-08;4!UBERON:0001262;7.99e-08;4!UBERON:0004786;7.99e-08;4!UBERON:0004808;7.99e-08;4!UBERON:0001277;7.99e-08;4!UBERON:0005631;4.41e-07;10!UBERON:0000158;4.41e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.69e-22,3;UBERON:0001905,8.66e-16,2;UBERON:0002757,8.66e-16,2;UBERON:0010134,8.66e-16,2;UBERON:0005408,8.66e-16,2;UBERON:0001899,8.66e-16,2;UBERON:0003124,5.89e-10,7;UBERON:0005409,2.38e-09,25;UBERON:0003350,1.93e-08,8;UBERON:0004913,2.13e-08,1;UBERON:0003703,2.13e-08,1;UBERON:0001174,2.13e-08,1;UBERON:0004914,2.13e-08,1;UBERON:0003296,2.47e-08,4;UBERON:0010133,2.47e-08,4;UBERON:0002784,2.47e-08,4;UBERON:0001764,3.53e-08,1;UBERON:0001825,3.53e-08,1;UBERON:0001052,3.67e-08,4;UBERON:0001242,8.57e-08,4;UBERON:0001262,8.57e-08,4;UBERON:0004786,8.57e-08,4;UBERON:0004808,8.57e-08,4;UBERON:0001277,8.57e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,3.27295344709002,0,0.365921118388786,0.132529768321485,0.580969714347592,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0.109750285408626,3.37205259772859,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.671928512795438,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,2.33369875465408,0.977826347298073,4.14701507651495,1.92354946143911,4.26427820814908,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0.213452994739353,0,2.4495370916198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0.110929051536852,0,0.553394539744923,0,0,0,0,4.21501415226193,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00218227924896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43755459053117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,2.21784129325568,0,0,0,0,0,0,0,0,0,2.67850917939143,7.73452561103295,0,0,0,0,0,0,0,0,0,0,0,7.5673484094723,0,0,0,2.7875852228896,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35560560676583,2.19452264968085,0,0,0,0,0,0,0,0,3.62803705259916,0,0,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,0,10.9397410231864,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.827054095813604,0.50141507858475,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,3.27295344709002,0,0.365921118388786,0.132529768321485,0.580969714347592,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0.109750285408626,3.37205259772859,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.671928512795438,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92995134857262,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,2.33369875465408,0.977826347298073,4.14701507651495,1.92354946143911,4.26427820814908,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0.213452994739353,0,2.4495370916198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0.110929051536852,0,0.553394539744923,0,0,0,0,4.21501415226193,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00218227924896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43755459053117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,2.21784129325568,0,0,0,0,0,0,0,0,0,2.67850917939143,7.73452561103295,0,0,0,0,0,0,0,0,0,0,0,7.5673484094723,0,0,0,2.7875852228896,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35560560676583,2.19452264968085,0,0,0,0,0,0,0,0,3.62803705259916,0,0,0,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,0,10.9397410231864,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.827054095813604,0.50141507858475,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:113394964..113394983,- | |short_description=p@chr1:113394964..113394983,- | ||
}} | }} |
Latest revision as of 19:51, 27 July 2015
Short description: | p@chr1:113394964..113394983, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:113394964..113394983, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.69e-22 | 3 |
Merkel cell | 2.08e-15 | 2 |
keratinocyte | 1.22e-13 | 5 |
stratified squamous epithelial cell | 1.86e-11 | 6 |
keratin accumulating cell | 1.86e-11 | 6 |
stratified epithelial cell | 1.86e-11 | 6 |
keratinizing barrier epithelial cell | 1.86e-11 | 6 |
epithelial fate stem cell | 1.86e-11 | 6 |
stratified epithelial stem cell | 1.86e-11 | 6 |
surface ectodermal cell | 1.86e-11 | 6 |
epithelial cell of stomach | 1.62e-10 | 3 |
epithelial cell of alimentary canal | 1.11e-08 | 20 |
general ecto-epithelial cell | 2.21e-08 | 14 |
epidermal cell | 8.53e-08 | 9 |
intestinal epithelial cell | 8.57e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.69e-22 | 3 |
pineal body | 8.66e-16 | 2 |
regional part of epithalamus | 8.66e-16 | 2 |
secretory circumventricular organ | 8.66e-16 | 2 |
circumventricular organ | 8.66e-16 | 2 |
epithalamus | 8.66e-16 | 2 |
chorion | 5.89e-10 | 7 |
gastrointestinal system | 2.38e-09 | 25 |
epithelium of mucosa | 1.93e-08 | 8 |
hepatopancreatic ampulla | 2.13e-08 | 1 |
extrahepatic bile duct | 2.13e-08 | 1 |
common bile duct | 2.13e-08 | 1 |
duodenal papilla | 2.13e-08 | 1 |
gland of diencephalon | 2.47e-08 | 4 |
neuroendocrine gland | 2.47e-08 | 4 |
regional part of diencephalon | 2.47e-08 | 4 |
maxillary sinus | 3.53e-08 | 1 |
paranasal sinus | 3.53e-08 | 1 |
rectum | 3.67e-08 | 4 |
intestinal mucosa | 8.57e-08 | 4 |
wall of intestine | 8.57e-08 | 4 |
gastrointestinal system mucosa | 8.57e-08 | 4 |
gastrointestinal system epithelium | 8.57e-08 | 4 |
intestinal epithelium | 8.57e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.72e-15 | 2 |
adenocarcinoma | 3.05e-13 | 25 |
gastrointestinal system cancer | 1.20e-12 | 14 |
carcinoma | 1.45e-10 | 106 |
cystadenocarcinoma | 7.01e-09 | 1 |
mucinous cystadenocarcinoma | 7.01e-09 | 1 |
cell type cancer | 2.23e-08 | 143 |
paranasal sinus cancer | 3.53e-08 | 1 |
maxillary sinus cancer | 3.53e-08 | 1 |
islet cell tumor | 4.07e-08 | 1 |
endocrine pancreas cancer | 4.07e-08 | 1 |
pancreatic endocrine carcinoma | 4.07e-08 | 1 |