FFCP PHASE1:Hg19::chr1:20302285..20302302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:20302285..20302302,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:20302285..20302302,- | |||
|id=chr1:20302285..20302302,- | |||
|ontology_enrichment_celltype=CL:0002322!1.72e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002521;9.58e-09;3!CL:0000136;2.76e-07;13!CL:0002616;4.88e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.24e-08,3;CL:0002616,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.20e-07;1!UBERON:0010226;1.49e-07;1!UBERON:0010115;2.03e-07;1!UBERON:0005062;4.28e-07;4!UBERON:0007284;4.28e-07;4 | |||
|ontology_enrichment_disease=DOID:114!6.41e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.07e-12;2!DOID:178;4.88e-07;1!DOID:326;4.88e-07;1!DOID:3978;4.88e-07;1!DOID:3394;4.88e-07;1!DOID:5844;4.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.45e-12,2;DOID:178,4.34e-07,1;DOID:326,4.34e-07,1;DOID:3978,4.34e-07,1;DOID:3394,4.34e-07,1;DOID:5844,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.17e-24!115;UBERON:0004151!2.85e-10!3;UBERON:0002081!2.02e-07!2;UBERON:0002133!2.65e-07!2;UBERON:0007100!2.67e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.05e-19;3!UBERON:0007100;3.83e-14;25!UBERON:0002081;1.38e-13;2!UBERON:0002133;2.32e-13;2!UBERON:0003978;3.40e-09;3!UBERON:0000946;3.40e-09;3!UBERON:0002190;9.58e-09;3!UBERON:0002107;4.62e-08;19!UBERON:0006925;4.62e-08;19!UBERON:0002079;1.20e-07;1!UBERON:0002134;1.27e-07;1!UBERON:0005208;1.27e-07;1!UBERON:0004145;1.27e-07;1!UBERON:0005946;1.27e-07;1!UBERON:0005965;1.27e-07;1!UBERON:0002078;1.27e-07;1!UBERON:0002084;1.49e-07;1!UBERON:0002082;1.49e-07;1!UBERON:0002363;2.03e-07;1!UBERON:0002135;2.03e-07;1!UBERON:0001301;2.59e-07;1!UBERON:0000996;4.88e-07;1!UBERON:0000948;8.66e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.99e-19,3;UBERON:0002081,1.38e-13,2;UBERON:0010227,1.38e-13,2;UBERON:0002133,2.40e-13,2;UBERON:0007100,4.40e-13,27;UBERON:0007023,5.80e-13,114;UBERON:0003978,3.47e-09,3;UBERON:0009751,3.47e-09,3;UBERON:0000946,3.47e-09,3;UBERON:0002523,3.47e-09,3;UBERON:0005983,3.47e-09,3;UBERON:0002165,3.47e-09,3;UBERON:0002062,3.47e-09,3;UBERON:0007280,3.47e-09,3;UBERON:0002190,1.24e-08,3;UBERON:0003103,1.76e-08,68;UBERON:0002107,4.65e-08,19;UBERON:0006925,4.65e-08,19;UBERON:0008836,4.65e-08,19;UBERON:0002079,1.20e-07,1;UBERON:0002134,1.27e-07,1;UBERON:0005208,1.27e-07,1;UBERON:0005946,1.27e-07,1;UBERON:0005965,1.27e-07,1;UBERON:0002078,1.27e-07,1;UBERON:0002084,1.44e-07,1;UBERON:0002082,1.44e-07,1;UBERON:0010226,1.44e-07,1;UBERON:0002363,1.97e-07,1;UBERON:0007645,1.97e-07,1;UBERON:0007647,1.97e-07,1;UBERON:0010115,1.97e-07,1;UBERON:0002135,2.09e-07,1;UBERON:0001301,3.02e-07,1;UBERON:0000996,4.89e-07,1;UBERON:0008835,6.43e-07,22;UBERON:0003894,6.43e-07,22 | |||
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| ||
|short_description=p@chr1:20302285..20302302,- | |||
}} | }} |
Latest revision as of 02:22, 28 July 2015
Short description: | p@chr1:20302285..20302302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20302285..20302302, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.24e-08 | 3 |
perirenal adipocyte cell | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.99e-19 | 3 |
cardiac atrium | 1.38e-13 | 2 |
future cardiac atrium | 1.38e-13 | 2 |
atrioventricular valve | 2.40e-13 | 2 |
primary circulatory organ | 4.40e-13 | 27 |
adult organism | 5.80e-13 | 114 |
valve | 3.47e-09 | 3 |
cardiac mesenchyme | 3.47e-09 | 3 |
cardial valve | 3.47e-09 | 3 |
tunica intima | 3.47e-09 | 3 |
heart layer | 3.47e-09 | 3 |
endocardium | 3.47e-09 | 3 |
endocardial cushion | 3.47e-09 | 3 |
presumptive endocardium | 3.47e-09 | 3 |
subcutaneous adipose tissue | 1.24e-08 | 3 |
compound organ | 1.76e-08 | 68 |
liver | 4.65e-08 | 19 |
digestive gland | 4.65e-08 | 19 |
liver bud | 4.65e-08 | 19 |
left cardiac atrium | 1.20e-07 | 1 |
tricuspid valve | 1.27e-07 | 1 |
right atrium valve | 1.27e-07 | 1 |
outflow tract of atrium | 1.27e-07 | 1 |
outflow part of right atrium | 1.27e-07 | 1 |
right cardiac atrium | 1.27e-07 | 1 |
heart left ventricle | 1.44e-07 | 1 |
cardiac ventricle | 1.44e-07 | 1 |
future cardiac ventricle | 1.44e-07 | 1 |
dura mater | 1.97e-07 | 1 |
future meninx | 1.97e-07 | 1 |
ectomeninx | 1.97e-07 | 1 |
future dura mater | 1.97e-07 | 1 |
mitral valve | 2.09e-07 | 1 |
epididymis | 3.02e-07 | 1 |
vagina | 4.89e-07 | 1 |
hepatic diverticulum | 6.43e-07 | 22 |
liver primordium | 6.43e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.45e-12 | 2 |
vascular disease | 4.34e-07 | 1 |
ischemia | 4.34e-07 | 1 |
extrinsic cardiomyopathy | 4.34e-07 | 1 |
myocardial ischemia | 4.34e-07 | 1 |
myocardial infarction | 4.34e-07 | 1 |