FFCP PHASE1:Hg19::chr1:206758527..206758548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:206758527..206758548,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr1:206758527..206758548,+ | |description=CAGE_peak_at_chr1:206758527..206758548,+ | ||
|id=chr1:206758527..206758548,+ | |id=chr1:206758527..206758548,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.10e-46!140;CL:0002031!7.86e-40!124;CL:0000766!1.42e-39!76;CL:0002087!4.40e-37!119;CL:0000557!4.38e-35!71;CL:0000037!3.47e-34!172;CL:0000566!3.47e-34!172;CL:0000839!7.12e-34!70;CL:0002032!7.19e-33!165;CL:0000837!7.19e-33!165;CL:0002057!4.08e-32!42;CL:0000988!4.65e-32!182;CL:0002009!1.24e-29!65;CL:0000860!3.34e-29!45;CL:0002194!3.96e-29!63;CL:0000576!3.96e-29!63;CL:0000040!3.96e-29!63;CL:0000559!3.96e-29!63;CL:0000763!5.92e-25!112;CL:0000049!5.92e-25!112;CL:0002274!7.44e-09!5;CL:0000457!7.44e-09!5;CL:0002191!7.44e-09!5;CL:0000097!7.44e-09!5;CL:0000831!7.44e-09!5;CL:0002028!7.44e-09!5;CL:0000838!7.68e-08!52;CL:0000542!1.38e-07!53;CL:0000051!1.38e-07!53;CL:0000134!7.56e-07!358 | |ontology_enrichment_celltype=CL:0000738!3.10e-46!140;CL:0002031!7.86e-40!124;CL:0000766!1.42e-39!76;CL:0002087!4.40e-37!119;CL:0000557!4.38e-35!71;CL:0000037!3.47e-34!172;CL:0000566!3.47e-34!172;CL:0000839!7.12e-34!70;CL:0002032!7.19e-33!165;CL:0000837!7.19e-33!165;CL:0002057!4.08e-32!42;CL:0000988!4.65e-32!182;CL:0002009!1.24e-29!65;CL:0000860!3.34e-29!45;CL:0002194!3.96e-29!63;CL:0000576!3.96e-29!63;CL:0000040!3.96e-29!63;CL:0000559!3.96e-29!63;CL:0000763!5.92e-25!112;CL:0000049!5.92e-25!112;CL:0002274!7.44e-09!5;CL:0000457!7.44e-09!5;CL:0002191!7.44e-09!5;CL:0000097!7.44e-09!5;CL:0000831!7.44e-09!5;CL:0002028!7.44e-09!5;CL:0000838!7.68e-08!52;CL:0000542!1.38e-07!53;CL:0000051!1.38e-07!53;CL:0000134!7.56e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.20e-22;3!CL:0000097;7.09e-22;5!CL:0000473;7.82e-21;39!CL:0000234;7.82e-21;39!CL:0000860;1.43e-20;33!CL:0002057;1.43e-20;33!CL:0000766;1.73e-15;69!CL:0000094;9.06e-15;8!CL:0000163;2.96e-12;9!CL:0000081;8.89e-11;11!CL:0000763;1.61e-10;100!CL:0000576;1.28e-09;48!CL:0000738;1.45e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.44e-38,72;CL:0000839,3.91e-26,66;CL:0000557,1.06e-25,67;CL:0000763,5.66e-24,108;CL:0000049,5.66e-24,108;CL:0000775,1.20e-22,3;CL:0000738,1.63e-22,136;CL:0000097,8.38e-22,5;CL:0002028,8.38e-22,5;CL:0000473,1.01e-21,48;CL:0000234,1.01e-21,48;CL:0000860,6.93e-18,42;CL:0002057,6.93e-18,42;CL:0000037,1.95e-17,168;CL:0002194,6.81e-17,59;CL:0000576,6.81e-17,59;CL:0000040,6.81e-17,59;CL:0000559,6.81e-17,59;CL:0002032,1.45e-16,161;CL:0000837,1.45e-16,161;CL:0000988,2.45e-16,177;CL:0002009,2.86e-16,61;CL:0002031,7.64e-15,120;CL:0000094,8.62e-15,8;CL:0000163,3.24e-12,9;CL:0000081,8.57e-11,11;CL:0002087,1.82e-10,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-10;42!CL:0000049;9.18e-09;108!UBERON:0009143;4.10e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-34!102;UBERON:0003061!1.30e-34!102;UBERON:0002193!1.17e-32!112;UBERON:0002371!8.50e-31!80;UBERON:0001474!1.45e-27!86;UBERON:0002405!6.03e-26!115;UBERON:0004765!2.64e-22!101;UBERON:0001434!2.64e-22!101;UBERON:0003081!4.30e-10!216;UBERON:0002204!4.81e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.30e-34!102;UBERON:0003061!1.30e-34!102;UBERON:0002193!1.17e-32!112;UBERON:0002371!8.50e-31!80;UBERON:0001474!1.45e-27!86;UBERON:0002405!6.03e-26!115;UBERON:0004765!2.64e-22!101;UBERON:0001434!2.64e-22!101;UBERON:0003081!4.30e-10!216;UBERON:0002204!4.81e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.10e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-26,98;UBERON:0003061,1.41e-26,98;UBERON:0002193,2.24e-26,108;UBERON:0002405,2.53e-25,93;UBERON:0002371,2.59e-22,76;UBERON:0001474,1.84e-20,82;UBERON:0004765,2.26e-18,90;UBERON:0001434,3.16e-16,100;UBERON:0003081,7.90e-11,203;UBERON:0002204,1.91e-08,167;UBERON:0000029,2.33e-08,1 | |||
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|short_description=p@chr1:206758527..206758548,+ | |short_description=p@chr1:206758527..206758548,+ | ||
}} | }} |
Latest revision as of 02:56, 28 July 2015
Short description: | p@chr1:206758527..206758548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:206758527..206758548, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.44e-38 | 72 |
myeloid lineage restricted progenitor cell | 3.91e-26 | 66 |
granulocyte monocyte progenitor cell | 1.06e-25 | 67 |
myeloid cell | 5.66e-24 | 108 |
common myeloid progenitor | 5.66e-24 | 108 |
neutrophil | 1.20e-22 | 3 |
leukocyte | 1.63e-22 | 136 |
mast cell | 8.38e-22 | 5 |
basophil mast progenitor cell | 8.38e-22 | 5 |
defensive cell | 1.01e-21 | 48 |
phagocyte | 1.01e-21 | 48 |
classical monocyte | 6.93e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.93e-18 | 42 |
hematopoietic stem cell | 1.95e-17 | 168 |
monopoietic cell | 6.81e-17 | 59 |
monocyte | 6.81e-17 | 59 |
monoblast | 6.81e-17 | 59 |
promonocyte | 6.81e-17 | 59 |
hematopoietic oligopotent progenitor cell | 1.45e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-16 | 161 |
hematopoietic cell | 2.45e-16 | 177 |
macrophage dendritic cell progenitor | 2.86e-16 | 61 |
hematopoietic lineage restricted progenitor cell | 7.64e-15 | 120 |
granulocyte | 8.62e-15 | 8 |
endocrine cell | 3.24e-12 | 9 |
blood cell | 8.57e-11 | 11 |
nongranular leukocyte | 1.82e-10 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-26 | 98 |
blood island | 1.41e-26 | 98 |
hemolymphoid system | 2.24e-26 | 108 |
immune system | 2.53e-25 | 93 |
bone marrow | 2.59e-22 | 76 |
bone element | 1.84e-20 | 82 |
skeletal element | 2.26e-18 | 90 |
skeletal system | 3.16e-16 | 100 |
lateral plate mesoderm | 7.90e-11 | 203 |
musculoskeletal system | 1.91e-08 | 167 |
lymph node | 2.33e-08 | 1 |