FFCP PHASE1:Hg19::chr1:214175769..214175774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:214175769..214175774,+ | |||
|coexpression_cluster_id=C931 | |||
|description=CAGE_peak_at_chr1:214175769..214175774,+ | |description=CAGE_peak_at_chr1:214175769..214175774,+ | ||
|id=chr1:214175769..214175774,+ | |id=chr1:214175769..214175774,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.59e-19;12!CL:0002144;2.73e-09;3!CL:0000167;1.39e-07;1!CL:0000164;1.39e-07;1!CL:0000502;1.39e-07;1!CL:0000172;1.39e-07;1!CL:0002553;1.39e-07;1!CL:0000173;1.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.44e-19,12;CL:0002144,2.73e-09,3;CL:0002553,1.18e-07,1;CL:0000167,1.26e-07,1;CL:0000164,1.26e-07,1;CL:0000502,1.26e-07,1;CL:0000172,1.26e-07,1;CL:0000173,1.26e-07,1;CL:0002351,1.26e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.70e-08;1!CL:0002351;1.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.96e-11;10!DOID:0050619;3.43e-08;1!DOID:1357;3.43e-08;1!DOID:4430;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.72e-11,10;DOID:0050619,3.55e-08,1;DOID:1357,3.55e-08,1;DOID:4430,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-15!94;UBERON:0001016!2.80e-15!94;UBERON:0001017!1.18e-14!82;UBERON:0005743!3.82e-14!86;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0000955!2.01e-11!69;UBERON:0006238!2.01e-11!69;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0007023!2.29e-10!115;UBERON:0002346!4.27e-10!90;UBERON:0003080!4.46e-10!42;UBERON:0002616!9.54e-10!59;UBERON:0003075!1.43e-08!86;UBERON:0007284!1.43e-08!86;UBERON:0003056!2.57e-07!61;UBERON:0000924!3.36e-07!173;UBERON:0006601!3.36e-07!173;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9;UBERON:0001893!6.15e-07!34;UBERON:0002420!8.12e-07!9;UBERON:0007245!8.12e-07!9;UBERON:0010009!8.12e-07!9;UBERON:0010011!8.12e-07!9;UBERON:0000454!8.12e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.88e-12;19!UBERON:0006925;3.88e-12;19!UBERON:0010523;2.73e-09;3!UBERON:0001915;2.73e-09;3!UBERON:0001982;2.73e-09;3!UBERON:0002423;4.33e-09;25!UBERON:0002368;1.77e-08;33!UBERON:0001764;3.43e-08;1!UBERON:0001825;3.43e-08;1!UBERON:0000941;7.70e-08;1!UBERON:0001785;7.70e-08;1!UBERON:0002464;7.70e-08;1!UBERON:0004904;7.70e-08;1!UBERON:0001021;7.70e-08;1!UBERON:0002346;1.01e-07;4!UBERON:0000923;1.01e-07;4!UBERON:0010316;1.01e-07;4!UBERON:0005291;1.01e-07;4!UBERON:0002365;4.65e-07;31!UBERON:0002330;4.65e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.66e-12,19;UBERON:0006925,3.66e-12,19;UBERON:0008836,3.66e-12,19;UBERON:0008835,1.99e-10,22;UBERON:0003894,1.99e-10,22;UBERON:0009854,5.97e-10,23;UBERON:0010523,2.73e-09,3;UBERON:0001915,2.73e-09,3;UBERON:0001982,2.73e-09,3;UBERON:0007499,4.14e-09,25;UBERON:0009497,4.14e-09,25;UBERON:0000015,4.14e-09,25;UBERON:0002423,4.14e-09,25;UBERON:0006235,4.14e-09,25;UBERON:0004161,4.14e-09,25;UBERON:0009856,9.77e-09,26;UBERON:0002368,2.07e-08,35;UBERON:0001764,3.55e-08,1;UBERON:0001825,3.55e-08,1;UBERON:0000941,6.97e-08,1;UBERON:0001785,6.97e-08,1;UBERON:0002464,6.97e-08,1;UBERON:0004904,6.97e-08,1;UBERON:0001021,6.97e-08,1;UBERON:0003902,6.97e-08,1;UBERON:0005425,6.97e-08,1;UBERON:0002365,3.11e-07,31;UBERON:0002330,3.11e-07,31 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619737604642413,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,1.70843440283719,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,10.1404027857465,2.94848165003288,4.13552934676983,0.441463099414651,1.10689594688802,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0.577465791044295,0,1.71228737011138,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.76228387266739,3.90419561572865,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,3.27512572210559,0.511343412510774,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0.120596438625408,0,0.884634079449797,0,0,0,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.176915129006678,0,2.07564790076435,0.617819694732514,0.208843899010911,0.337005664903385,0,0.234264445725339,0,0.586993856796269,0,0.789168805698781,0,0.91821828489147,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,7.37858490806448,0,0.372757606696298,0,0.135904206073614,0,0,0,0.600420288709789,1.36905378891993,0,0,0,0,0.687481272035051,0,0,0,0,0.268733889946905,0,0,3.54524320382506,2.63730746819733,4.71824806979294,0.492137407573744,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.439656701034247,0,0.517131825446202,0.52893040697076,0,0,0,0.157204305099666,0,0.496166021811951,0,0.365377795142688,0,0,0,0,0,5.0257310800075,0,0,0,0,0.221858103073705,0.248385611765534,0.415045904808692,0.124980407962107,0,0,0,0.468334905806882,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.255788742607303,0,0.629063767423586,2.18419276384028,0,19.1317428091515,0.495743057036009,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0.319267718114302,0,0.756215088665154,0,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0,3.34155364283279,0,0,0.336283722218824,1.21393120847326,0.227662191351298,0,0.115233987555779,0,0.0679697329768317,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,0,0,0.102662806856247,0,0,3.04121302500737,4.77481860387284,0,0.5647304101948,0.769583617218004,1.66059127923341,0,0.218559560503957,5.17349025997675,0.245148321753905,1.41405928260976,0.392616934229891,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0.473314686579554,0.0679914901909147,1.30905207102113,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0.535928260312357,0.829169439458779,0.517164979309476,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0.12729431655633,0.808468755832877,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 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| ||
|short_description=p@chr1:214175769..214175774,+ | |short_description=p@chr1:214175769..214175774,+ | ||
}} | }} |
Latest revision as of 03:45, 28 July 2015
Short description: | p@chr1:214175769..214175774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214175769..214175774, + |
Coexpression cluster: | C931_neuroectodermal_peripheral_maxillary_gastrointestinal_Hepatocyte_small_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.44e-19 | 12 |
capillary endothelial cell | 2.73e-09 | 3 |
lung fibroblast | 1.18e-07 | 1 |
peptide hormone secreting cell | 1.26e-07 | 1 |
enteroendocrine cell | 1.26e-07 | 1 |
type D enteroendocrine cell | 1.26e-07 | 1 |
somatostatin secreting cell | 1.26e-07 | 1 |
pancreatic D cell | 1.26e-07 | 1 |
progenitor cell of endocrine pancreas | 1.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 3.66e-12 | 19 |
digestive gland | 3.66e-12 | 19 |
liver bud | 3.66e-12 | 19 |
hepatic diverticulum | 1.99e-10 | 22 |
liver primordium | 1.99e-10 | 22 |
digestive tract diverticulum | 5.97e-10 | 23 |
microcirculatory vessel | 2.73e-09 | 3 |
endothelium of capillary | 2.73e-09 | 3 |
capillary | 2.73e-09 | 3 |
epithelial sac | 4.14e-09 | 25 |
epithelium of foregut-midgut junction | 4.14e-09 | 25 |
anatomical boundary | 4.14e-09 | 25 |
hepatobiliary system | 4.14e-09 | 25 |
foregut-midgut junction | 4.14e-09 | 25 |
septum transversum | 4.14e-09 | 25 |
sac | 9.77e-09 | 26 |
endocrine gland | 2.07e-08 | 35 |
maxillary sinus | 3.55e-08 | 1 |
paranasal sinus | 3.55e-08 | 1 |
cranial nerve II | 6.97e-08 | 1 |
cranial nerve | 6.97e-08 | 1 |
nerve trunk | 6.97e-08 | 1 |
nerve connecting eye with brain | 6.97e-08 | 1 |
nerve | 6.97e-08 | 1 |
retinal neural layer | 6.97e-08 | 1 |
presumptive neural retina | 6.97e-08 | 1 |
exocrine gland | 3.11e-07 | 31 |
exocrine system | 3.11e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.72e-11 | 10 |
paranasal sinus cancer | 3.55e-08 | 1 |
maxillary sinus cancer | 3.55e-08 | 1 |
somatostatinoma | 1.26e-07 | 1 |