FFCP PHASE1:Hg19::chr1:215130919..215130936,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:215130919..215130936,+ to FFCP PHASE1:Hg19::chr1:215130919..215130936,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:215130919..215130936,+ | |||
|coexpression_cluster_id=C3482 | |||
|description=CAGE_peak_at_chr1:215130919..215130936,+ | |||
|id=chr1:215130919..215130936,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.71e-35!180;CL:0000057!1.35e-26!75;CL:0002620!3.10e-18!23;CL:0000680!4.48e-18!57;CL:0000056!4.48e-18!57;CL:0000355!4.48e-18!57;CL:0000359!4.98e-18!32;CL:0000192!1.28e-17!42;CL:0000514!1.28e-17!42;CL:0000048!7.10e-17!430;CL:0000723!8.59e-17!436;CL:0000187!1.30e-16!54;CL:0000034!5.95e-16!444;CL:0000183!8.51e-16!59;CL:0000393!2.38e-15!60;CL:0000211!2.38e-15!60;CL:0002371!2.65e-12!591;CL:0002334!7.29e-12!12;CL:0000144!2.25e-11!625;CL:0000548!8.12e-11!679;CL:0000004!8.12e-11!679;CL:0000255!8.12e-11!679;CL:0000012!1.29e-10!682;CL:0000003!1.29e-08!722;CL:0002556!2.24e-08!6;CL:0002539!1.59e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000346;3.57e-20;3!CL:1000428;3.57e-20;3!CL:0002620;1.94e-16;23!CL:0002559;2.54e-12;5!CL:0002539;3.55e-10;10!CL:0002570;1.88e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.35e-20,3;CL:1000428,4.35e-20,3;CL:0002620,1.58e-16,23;CL:0000057,1.23e-13,76;CL:0002559,2.85e-12,5;CL:0002539,2.50e-10,10;CL:0000048,9.71e-09,427;CL:0000723,1.54e-08,433;CL:0000034,2.79e-08,441;CL:0002570,1.72e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.38e-08!5;DOID:450!2.38e-08!5;DOID:66!2.38e-08!5;DOID:423!2.38e-08!5;DOID:0080000!2.38e-08!5;DOID:11722!2.38e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.24e-25!83;UBERON:0002329!5.24e-25!83;UBERON:0003077!5.24e-25!83;UBERON:0003059!5.24e-25!83;UBERON:0007282!5.24e-25!83;UBERON:0009618!5.24e-25!83;UBERON:0007285!5.24e-25!83;UBERON:0000486!2.27e-21!82;UBERON:0004290!2.01e-20!70;UBERON:0001134!3.00e-16!61;UBERON:0002036!3.00e-16!61;UBERON:0003082!3.00e-16!61;UBERON:0002385!1.99e-15!63;UBERON:0001015!1.99e-15!63;UBERON:0000383!1.99e-15!63;UBERON:0003102!3.67e-15!95;UBERON:0002199!3.84e-14!45;UBERON:0002416!3.84e-14!45;UBERON:0002097!1.13e-13!40;UBERON:0004573!6.94e-13!33;UBERON:0004571!6.94e-13!33;UBERON:0001637!9.65e-13!42;UBERON:0003509!9.65e-13!42;UBERON:0004572!9.65e-13!42;UBERON:0005256!1.80e-11!143;UBERON:0000475!5.10e-09!365;UBERON:0002100!1.14e-08!216;UBERON:0001758!2.24e-08!6;UBERON:0003672!2.24e-08!6;UBERON:0001981!8.70e-08!60;UBERON:0007500!8.70e-08!60;UBERON:0004537!8.70e-08!60;UBERON:0006965!8.70e-08!60;UBERON:0004237!1.59e-07!10;UBERON:0004695!1.59e-07!10;UBERON:0002111!1.59e-07!10;UBERON:0004178!1.59e-07!10;UBERON:0001135!4.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.57e-20;3!UBERON:0001992;3.57e-20;3!UBERON:0002097;4.11e-14;41!UBERON:0002073;2.54e-12;5!UBERON:0003102;1.25e-11;50!UBERON:0002199;2.43e-11;46!UBERON:0002416;2.43e-11;46!UBERON:0004237;3.55e-10;10!UBERON:0004695;3.55e-10;10!UBERON:0002111;3.55e-10;10!UBERON:0004178;3.55e-10;10!UBERON:0004573;7.81e-08;33!UBERON:0004571;7.81e-08;33!UBERON:0000947;2.40e-07;21!UBERON:0010191;2.40e-07;21!UBERON:0002067;4.83e-07;9!UBERON:0001135;8.11e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,4.35e-20,3;UBERON:0001992,4.35e-20,3;UBERON:0002199,1.07e-17,46;UBERON:0002416,1.07e-17,46;UBERON:0002097,8.84e-17,41;UBERON:0002073,2.85e-12,5;UBERON:0005086,2.85e-12,5;UBERON:0004237,2.50e-10,10;UBERON:0004695,2.50e-10,10;UBERON:0002111,2.50e-10,10;UBERON:0004178,2.50e-10,10;UBERON:0004573,1.46e-08,33;UBERON:0004571,1.46e-08,33;UBERON:0003102,2.37e-08,99;UBERON:0000947,1.96e-07,21;UBERON:0010191,1.96e-07,21;UBERON:0002329,3.57e-07,71;UBERON:0003059,3.57e-07,71;UBERON:0007282,3.57e-07,71;UBERON:0004290,3.57e-07,71;UBERON:0009618,3.57e-07,71;UBERON:0003077,4.74e-07,72;UBERON:0007285,4.74e-07,72;UBERON:0002067,5.14e-07,9;UBERON:0004016,5.14e-07,9;UBERON:0010083,5.14e-07,9;UBERON:0007524,6.23e-07,73;UBERON:0001135,6.46e-07,15 | |||
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|short_description=p@chr1:215130919..215130936,+ | |||
}} | }} |
Latest revision as of 03:47, 28 July 2015
Short description: | p@chr1:215130919..215130936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:215130919..215130936, + |
Coexpression cluster: | C3482_Fibroblast_Hair_Preadipocyte_Smooth_mesenchymal_Adipocyte_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.35e-20 | 3 |
stem cell of epidermis | 4.35e-20 | 3 |
skin fibroblast | 1.58e-16 | 23 |
fibroblast | 1.23e-13 | 76 |
hair follicle cell | 2.85e-12 | 5 |
aortic smooth muscle cell | 2.50e-10 | 10 |
multi fate stem cell | 9.71e-09 | 427 |
somatic stem cell | 1.54e-08 | 433 |
stem cell | 2.79e-08 | 441 |
mesenchymal stem cell of adipose | 1.72e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 4.35e-20 | 3 |
papillary layer of dermis | 4.35e-20 | 3 |
integument | 1.07e-17 | 46 |
integumental system | 1.07e-17 | 46 |
skin of body | 8.84e-17 | 41 |
hair follicle | 2.85e-12 | 5 |
hair follicle placode | 2.85e-12 | 5 |
blood vessel smooth muscle | 2.50e-10 | 10 |
arterial system smooth muscle | 2.50e-10 | 10 |
artery smooth muscle tissue | 2.50e-10 | 10 |
aorta smooth muscle tissue | 2.50e-10 | 10 |
systemic artery | 1.46e-08 | 33 |
systemic arterial system | 1.46e-08 | 33 |
surface structure | 2.37e-08 | 99 |
aorta | 1.96e-07 | 21 |
aortic system | 1.96e-07 | 21 |
somite | 3.57e-07 | 71 |
presomitic mesoderm | 3.57e-07 | 71 |
presumptive segmental plate | 3.57e-07 | 71 |
dermomyotome | 3.57e-07 | 71 |
trunk paraxial mesoderm | 3.57e-07 | 71 |
paraxial mesoderm | 4.74e-07 | 72 |
presumptive paraxial mesoderm | 4.74e-07 | 72 |
dermis | 5.14e-07 | 9 |
dermatome | 5.14e-07 | 9 |
future dermis | 5.14e-07 | 9 |
dense mesenchyme tissue | 6.23e-07 | 73 |
smooth muscle tissue | 6.46e-07 | 15 |