FFCP PHASE1:Hg19::chr1:231983510..231983519,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:231983510..231983519,-
|short_description=p@chr1:231983510..231983519,-
|description=CAGE_peak_at_chr1:231983510..231983519,-
|association_with_transcript=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:231983510..231983519,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr1:231983510..231983519,- | |||
|id=chr1:231983510..231983519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.10e-41;1!UBERON:0010227;2.21e-40;1!UBERON:0010226;2.21e-40;1!UBERON:0004872;5.22e-07;7 | |||
|ontology_enrichment_disease=DOID:114!2.42e-50!2;DOID:178!5.93e-26!1;DOID:326!5.93e-26!1;DOID:3978!5.93e-26!1;DOID:3394!5.93e-26!1;DOID:5844!5.93e-26!1;DOID:1287!8.66e-26!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.86e-79;2!DOID:178;2.21e-40;1!DOID:326;2.21e-40;1!DOID:3978;2.21e-40;1!DOID:3394;2.21e-40;1!DOID:5844;2.21e-40;1!DOID:1287;2.45e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.22e-79,2;DOID:178,3.30e-40,1;DOID:326,3.30e-40,1;DOID:3978,3.30e-40,1;DOID:3394,3.30e-40,1;DOID:5844,3.30e-40,1;DOID:1287,3.31e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.24e-58!27;UBERON:0004151!5.51e-34!3;UBERON:0003978!1.77e-33!3;UBERON:0009751!1.77e-33!3;UBERON:0000946!1.77e-33!3;UBERON:0002523!1.77e-33!3;UBERON:0005983!1.77e-33!3;UBERON:0002165!1.77e-33!3;UBERON:0002062!1.77e-33!3;UBERON:0007280!1.77e-33!3;UBERON:0002079!3.58e-26!1;UBERON:0002084!4.61e-26!1;UBERON:0002082!4.61e-26!1;UBERON:0004706!4.61e-26!1;UBERON:0000948!5.49e-26!24;UBERON:0005498!5.49e-26!24;UBERON:0004140!5.49e-26!24;UBERON:0009881!5.49e-26!24;UBERON:0004141!5.49e-26!24;UBERON:0003084!5.49e-26!24;UBERON:0007005!5.49e-26!24;UBERON:0004139!5.49e-26!24;UBERON:0004291!5.49e-26!24;UBERON:0002146!7.62e-26!1;UBERON:0005623!7.62e-26!1;UBERON:0002135!1.26e-25!1;UBERON:0003103!6.37e-23!69;UBERON:0001009!5.03e-14!113;UBERON:0002081!8.28e-14!2;UBERON:0002133!1.55e-13!2;UBERON:0007023!1.49e-10!115;UBERON:0002300!1.30e-09!3;UBERON:0002342!5.55e-08!14;UBERON:0005062!5.55e-08!14;UBERON:0004872!1.30e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.89e-53;3!UBERON:0002084;2.21e-40;1!UBERON:0002079;2.21e-40;1!UBERON:0002082;2.21e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;5.69e-21;2!UBERON:0000948;5.56e-17;22!UBERON:0003103;5.37e-09;61!UBERON:0001009;6.88e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.75e-53,3;UBERON:0002079,1.48e-40,1;UBERON:0002084,2.21e-40,1;UBERON:0002082,2.21e-40,1;UBERON:0010226,2.21e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0002081,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0000948,1.13e-15,24;UBERON:0005498,1.13e-15,24;UBERON:0004140,1.13e-15,24;UBERON:0009881,1.13e-15,24;UBERON:0004141,1.13e-15,24;UBERON:0003084,1.13e-15,24;UBERON:0007005,1.13e-15,24;UBERON:0004139,1.13e-15,24;UBERON:0004291,1.13e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0001009,1.80e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,1.19807400299395,2.14613024068285,0.89268582976749,2.68733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,1.19807400299395,2.14613024068285,0.89268582976749,2.68733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:231983510..231983519,- | |||
}} | }} |
Latest revision as of 05:04, 28 July 2015
Short description: | p@chr1:231983510..231983519, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:231983510..231983519, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.75e-53 | 3 |
left cardiac atrium | 1.48e-40 | 1 |
heart left ventricle | 2.21e-40 | 1 |
cardiac ventricle | 2.21e-40 | 1 |
future cardiac ventricle | 2.21e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
cardiac atrium | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
heart | 1.13e-15 | 24 |
primitive heart tube | 1.13e-15 | 24 |
primary heart field | 1.13e-15 | 24 |
anterior lateral plate mesoderm | 1.13e-15 | 24 |
heart tube | 1.13e-15 | 24 |
heart primordium | 1.13e-15 | 24 |
cardiac mesoderm | 1.13e-15 | 24 |
cardiogenic plate | 1.13e-15 | 24 |
heart rudiment | 1.13e-15 | 24 |
compound organ | 3.48e-15 | 68 |
circulatory system | 1.80e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.22e-79 | 2 |
vascular disease | 3.30e-40 | 1 |
ischemia | 3.30e-40 | 1 |
extrinsic cardiomyopathy | 3.30e-40 | 1 |
myocardial ischemia | 3.30e-40 | 1 |
myocardial infarction | 3.30e-40 | 1 |
cardiovascular system disease | 3.31e-40 | 4 |