FFCP PHASE1:Hg19::chr20:3287602..3287615,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:3287602..3287615,- | |||
|description=CAGE_peak_at_chr20:3287602..3287615,- | |description=CAGE_peak_at_chr20:3287602..3287615,- | ||
|id=chr20:3287602..3287615,- | |id=chr20:3287602..3287615,- | ||
|ontology_enrichment_celltype=CL:0000235!2.23e-12!10 | |ontology_enrichment_celltype=CL:0000235!2.23e-12!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.43e-23;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.86e-23,6 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;2.89e-12;3!DOID:3908;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,3.24e-12,3;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.61e-34;1!UBERON:0000026;3.61e-34;1!UBERON:0008784;3.61e-34;1!UBERON:0006058;3.61e-34;1!UBERON:0003663;3.61e-34;1!UBERON:0004256;3.61e-34;1!UBERON:0004708;3.61e-34;1!UBERON:0002101;3.61e-34;1!UBERON:0004709;3.61e-34;1!UBERON:0002529;3.61e-34;1!UBERON:0010538;3.61e-34;1!UBERON:0003661;3.61e-34;1!UBERON:0010890;3.61e-34;1!UBERON:0002471;3.61e-34;1!UBERON:0001383;3.61e-34;1!UBERON:0010758;3.61e-34;1!UBERON:0010707;3.61e-34;1!UBERON:0000978;3.61e-34;1!UBERON:0002103;3.61e-34;1!UBERON:0001665;3.61e-34;1!UBERON:0003823;3.61e-34;1!UBERON:0000154;3.61e-34;1!UBERON:0010709;3.61e-34;1!UBERON:0005090;7.67e-18;2!UBERON:0001630;7.67e-18;2!UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0001134;2.66e-09;16!UBERON:0002036;2.66e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.61e-34,1;UBERON:0001389,3.61e-34,1;UBERON:0000026,3.61e-34,1;UBERON:0008784,3.61e-34,1;UBERON:0006058,3.61e-34,1;UBERON:0003663,3.61e-34,1;UBERON:0004256,3.61e-34,1;UBERON:0004708,3.61e-34,1;UBERON:0002101,3.61e-34,1;UBERON:0004709,3.61e-34,1;UBERON:0002529,3.61e-34,1;UBERON:0010538,3.61e-34,1;UBERON:0003661,3.61e-34,1;UBERON:0010890,3.61e-34,1;UBERON:0002471,3.61e-34,1;UBERON:0001383,3.61e-34,1;UBERON:0004357,3.61e-34,1;UBERON:0004347,3.61e-34,1;UBERON:0005420,3.61e-34,1;UBERON:0005732,3.61e-34,1;UBERON:0010758,3.61e-34,1;UBERON:0010707,3.61e-34,1;UBERON:0000978,3.61e-34,1;UBERON:0002103,3.61e-34,1;UBERON:0001665,3.61e-34,1;UBERON:0003823,3.61e-34,1;UBERON:0000154,3.61e-34,1;UBERON:0010709,3.61e-34,1;UBERON:0005733,3.61e-34,1;UBERON:0005730,3.61e-34,1;UBERON:0005090,7.67e-18,2;UBERON:0001630,7.67e-18,2;UBERON:0001723,2.89e-12,3;UBERON:0001033,2.89e-12,3;UBERON:0010056,2.89e-12,3 | |||
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|short_description=p@chr20:3287602..3287615,- | |short_description=p@chr20:3287602..3287615,- | ||
}} | }} |
Latest revision as of 13:13, 28 July 2015
Short description: | p@chr20:3287602..3287615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3287602..3287615, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.86e-23 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.61e-34 | 1 |
soleus muscle | 3.61e-34 | 1 |
appendage | 3.61e-34 | 1 |
lower limb segment | 3.61e-34 | 1 |
multi-limb segment region | 3.61e-34 | 1 |
hindlimb muscle | 3.61e-34 | 1 |
hindlimb zeugopod muscle | 3.61e-34 | 1 |
paired limb/fin | 3.61e-34 | 1 |
limb | 3.61e-34 | 1 |
pelvic appendage | 3.61e-34 | 1 |
limb segment | 3.61e-34 | 1 |
paired limb/fin segment | 3.61e-34 | 1 |
limb muscle | 3.61e-34 | 1 |
pelvic complex muscle | 3.61e-34 | 1 |
zeugopod | 3.61e-34 | 1 |
muscle of leg | 3.61e-34 | 1 |
paired limb/fin bud | 3.61e-34 | 1 |
limb bud | 3.61e-34 | 1 |
pelvic appendage bud | 3.61e-34 | 1 |
limb/fin field | 3.61e-34 | 1 |
subdivision of organism along appendicular axis | 3.61e-34 | 1 |
appendage girdle complex | 3.61e-34 | 1 |
leg | 3.61e-34 | 1 |
hindlimb | 3.61e-34 | 1 |
triceps surae | 3.61e-34 | 1 |
hindlimb zeugopod | 3.61e-34 | 1 |
posterior region of body | 3.61e-34 | 1 |
pelvic complex | 3.61e-34 | 1 |
limb field | 3.61e-34 | 1 |
hindlimb/pelvic fin field | 3.61e-34 | 1 |
muscle structure | 7.67e-18 | 2 |
muscle organ | 7.67e-18 | 2 |
tongue | 2.89e-12 | 3 |
gustatory system | 2.89e-12 | 3 |
future tongue | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 3.24e-12 | 3 |
non-small cell lung carcinoma | 7.49e-08 | 5 |