FFCP PHASE1:Hg19::chr20:35519525..35519538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35519525..35519538,- | |||
|description=CAGE_peak_at_chr20:35519525..35519538,- | |description=CAGE_peak_at_chr20:35519525..35519538,- | ||
|id=chr20:35519525..35519538,- | |id=chr20:35519525..35519538,- | ||
|ontology_enrichment_celltype=CL:0002087!2.21e-16!119;CL:0002009!3.79e-15!65;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0002031!1.91e-13!124;CL:0000557!1.04e-12!71;CL:0000839!2.72e-12!70;CL:0000738!4.72e-12!140;CL:0002057!5.63e-11!42;CL:0000766!5.77e-11!76;CL:0000037!7.58e-10!172;CL:0000566!7.58e-10!172;CL:0000860!1.21e-09!45;CL:0002032!1.51e-09!165;CL:0000837!1.51e-09!165;CL:0000988!5.07e-09!182;CL:0000763!1.55e-07!112;CL:0000049!1.55e-07!112;CL:0002393!2.74e-07!9;CL:0002397!2.74e-07!9 | |ontology_enrichment_celltype=CL:0002087!2.21e-16!119;CL:0002009!3.79e-15!65;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0002031!1.91e-13!124;CL:0000557!1.04e-12!71;CL:0000839!2.72e-12!70;CL:0000738!4.72e-12!140;CL:0002057!5.63e-11!42;CL:0000766!5.77e-11!76;CL:0000037!7.58e-10!172;CL:0000566!7.58e-10!172;CL:0000860!1.21e-09!45;CL:0002032!1.51e-09!165;CL:0000837!1.51e-09!165;CL:0000988!5.07e-09!182;CL:0000763!1.55e-07!112;CL:0000049!1.55e-07!112;CL:0002393!2.74e-07!9;CL:0002397!2.74e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000898;1.53e-14;3!CL:0000624;1.38e-12;6!CL:0002561;8.92e-11;2!CL:0000815;2.88e-10;2!CL:0000792;2.88e-10;2!CL:0002677;2.88e-10;2!CL:0000791;9.97e-09;18!CL:0000789;9.97e-09;18!CL:0002419;9.97e-09;18!CL:0002393;6.96e-08;6!CL:0002397;6.96e-08;6!CL:0000576;7.86e-08;48!CL:0002615;1.88e-07;3!CL:0000875;4.06e-07;3!CL:0002396;4.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,4.71e-14,3;CL:0002393,2.04e-13,9;CL:0002397,2.04e-13,9;CL:0002194,2.10e-12,59;CL:0000576,2.10e-12,59;CL:0000040,2.10e-12,59;CL:0000559,2.10e-12,59;CL:0000624,3.78e-12,6;CL:0002009,6.59e-12,61;CL:0000473,9.10e-12,48;CL:0000234,9.10e-12,48;CL:0002087,1.66e-11,115;CL:0002031,7.57e-11,120;CL:0002561,7.59e-11,2;CL:0000839,8.52e-11,66;CL:0000557,1.36e-10,67;CL:0000815,5.08e-10,2;CL:0000792,5.08e-10,2;CL:0002677,5.08e-10,2;CL:0000766,1.15e-09,72;CL:0000860,2.03e-09,42;CL:0002057,2.03e-09,42;CL:0000738,4.53e-09,136;CL:0000791,1.41e-08,18;CL:0000789,1.41e-08,18;CL:0002420,1.41e-08,18;CL:0002419,1.41e-08,18;CL:0000790,1.41e-08,18;CL:0002032,5.60e-08,161;CL:0000837,5.60e-08,161;CL:0002615,1.22e-07,3;CL:0000875,1.74e-07,3;CL:0002396,1.74e-07,3;CL:0000037,1.83e-07,168;CL:0000988,7.30e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.97e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-17!102;UBERON:0003061!1.47e-17!102;UBERON:0002193!3.70e-15!112;UBERON:0002371!1.36e-10!80;UBERON:0004765!1.08e-09!101;UBERON:0001434!1.08e-09!101;UBERON:0001474!5.65e-09!86;UBERON:0002405!7.38e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;8.92e-11;2!UBERON:0005942;8.92e-11;2!UBERON:0005932;8.92e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-11,98;UBERON:0003061,2.36e-11,98;UBERON:0005933,7.59e-11,2;UBERON:0005942,7.59e-11,2;UBERON:0005932,7.59e-11,2;UBERON:0002193,6.00e-10,108;UBERON:0002371,5.18e-09,76;UBERON:0001474,3.75e-08,82;UBERON:0002405,5.56e-08,93;UBERON:0004765,3.47e-07,90 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.845726424575827,5.00366491765652,1.78784437770915,1.74467704820074,0,0.631719873426831,0.783556884599516,0,0,0,0,0.247532705920093,0,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,1.11957737119962,0,0,0.726991193897824,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0.564727018627814,0,0,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,0,1.00499466102697,1.5644487552606,0,1.21079900526674,0,0.316462387440884,2.95757400836718,2.33864729961548,1.25795187305026,2.02191536063691,1.20141514273205,0.964353520182481,1.99508920618874,1.59133341759272,0.91332076882317,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,1.17903228824749,0.616804496998528,1.5046784585161,1.30368906653436,1.89379122293893,0,0.557052284425868,1.17842362989935,0.664601683750863,1.35401931882508,1.0247305578054,1.1705341280389,1.47994114143309,1.38175008892924,0.289803085735052,0.593146252648242,1.33770414044857,0,0.906474741580529,1.14966148080576,0.68725489096526,0.253019692019503,0.637130828648193,1.30216690771284,0,0,0,0,0.236777252044017,1.64225599384209,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0,0,0,0.97364218096405,0.696518949197069,2.12732736830184,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0.397589304964456,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,5.10804720835177,1.44375896333917,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0.651616610620649,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.891786973732369,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,0,0,0,1.2162378064119,0,6.32501818449095,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,1.42939065274673,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0.481764225311099,3.22879531505676,0,0.687010689511529,0.307240764308458,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0.511572370226872,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0.169346664131569,0,0,0.321506296930038,0.137539436597234,0.83088067605837,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.992332043623902,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0,2.69210374957114,0,0,0,0,0,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0.320075189082423,0.516644938982447,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,1.48863353516788,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.197318320688547,0,0,0.15698618570102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| ||
|short_description=p@chr20:35519525..35519538,- | |short_description=p@chr20:35519525..35519538,- | ||
}} | }} |
Latest revision as of 13:39, 28 July 2015
Short description: | p@chr20:35519525..35519538, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35519525..35519538, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.36e-11 | 98 |
blood island | 2.36e-11 | 98 |
hair root sheath | 7.59e-11 | 2 |
hair outer root sheath | 7.59e-11 | 2 |
bulb of hair follicle | 7.59e-11 | 2 |
hemolymphoid system | 6.00e-10 | 108 |
bone marrow | 5.18e-09 | 76 |
bone element | 3.75e-08 | 82 |
immune system | 5.56e-08 | 93 |
skeletal element | 3.47e-07 | 90 |