FFCP PHASE1:Hg19::chr20:47527269..47527280,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:47527269..47527280,+
|short_description=p@chr20:47527269..47527280,+
|description=CAGE_peak_at_chr20:47527269..47527280,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:47527269..47527280,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr20:47527269..47527280,+ | |||
|id=chr20:47527269..47527280,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.02e-30!140;CL:0000766!4.60e-30!76;CL:0002057!2.27e-28!42;CL:0002031!2.35e-27!124;CL:0000037!1.67e-26!172;CL:0000566!1.67e-26!172;CL:0002032!2.29e-26!165;CL:0000837!2.29e-26!165;CL:0000860!3.71e-26!45;CL:0000839!3.06e-25!70;CL:0000557!8.33e-25!71;CL:0002087!1.14e-24!119;CL:0000988!1.52e-24!182;CL:0000763!1.26e-21!112;CL:0000049!1.26e-21!112;CL:0002194!5.11e-21!63;CL:0000576!5.11e-21!63;CL:0000040!5.11e-21!63;CL:0000559!5.11e-21!63;CL:0002393!6.10e-21!9;CL:0002397!6.10e-21!9;CL:0002009!3.20e-20!65;CL:0000767!3.38e-13!3;CL:0000875!7.17e-13!3;CL:0002396!7.17e-13!3;CL:0000623!1.69e-12!3;CL:0000825!1.69e-12!3;CL:0000134!2.35e-09!358;CL:0002320!5.36e-09!365;CL:0002274!4.36e-08!5;CL:0000457!4.36e-08!5;CL:0002191!4.36e-08!5;CL:0000097!4.36e-08!5;CL:0000831!4.36e-08!5;CL:0002028!4.36e-08!5;CL:0000219!9.75e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.65e-59;3!CL:0000097;1.67e-36;5!CL:0000875;2.38e-27;3!CL:0002396;2.38e-27;3!CL:0000094;7.19e-23;8!CL:0000163;1.20e-20;9!CL:0000081;7.69e-17;11!CL:0000766;1.74e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,6.68e-60,3;CL:0000097,2.00e-36,5;CL:0002028,2.00e-36,5;CL:0000875,2.72e-27,3;CL:0002396,2.72e-27,3;CL:0000094,5.13e-23,8;CL:0000766,1.28e-21,72;CL:0000163,1.33e-20,9;CL:0002393,2.11e-20,9;CL:0002397,2.11e-20,9;CL:0000081,6.02e-17,11;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0000839,1.30e-10,66;CL:0000557,1.87e-10,67;CL:0002031,8.92e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.26e-21!80;UBERON:0001474!1.76e-19!86;UBERON:0002390!4.72e-17!102;UBERON:0003061!4.72e-17!102;UBERON:0004765!9.78e-16!101;UBERON:0001434!9.78e-16!101;UBERON:0002193!5.35e-15!112;UBERON:0002405!3.96e-13!115;UBERON:0002384!3.12e-09!375;UBERON:0002204!2.44e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.22e-09,76;UBERON:0001474,1.53e-08,82;UBERON:0004765,8.88e-08,90;UBERON:0002405,1.59e-07,93;UBERON:0002390,3.90e-07,98;UBERON:0003061,3.90e-07,98;UBERON:0001434,5.44e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.91914699048606,2.63187409637329,0,0,0,0,0,0,0.553995408531877,0,1.30206522429511,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0.211255286311942,0,0.838634582033504,0.673971786878971,0.150176892841506,0.32145117339416,1.14005097496499,0.39783335439818,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,8.35895729818376,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.91914699048606,2.63187409637329,0,0,0,0,0,0,0.553995408531877,0,1.30206522429511,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0.211255286311942,0,0.838634582033504,0.673971786878971,0.150176892841506,0.32145117339416,1.14005097496499,0.39783335439818,2.37463399894024,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,8.35895729818376,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:47527269..47527280,+ | |||
}} | }} |
Latest revision as of 14:55, 28 July 2015
Short description: | p@chr20:47527269..47527280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:47527269..47527280, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 6.68e-60 | 3 |
mast cell | 2.00e-36 | 5 |
basophil mast progenitor cell | 2.00e-36 | 5 |
non-classical monocyte | 2.72e-27 | 3 |
CD14-low, CD16-positive monocyte | 2.72e-27 | 3 |
granulocyte | 5.13e-23 | 8 |
myeloid leukocyte | 1.28e-21 | 72 |
endocrine cell | 1.33e-20 | 9 |
intermediate monocyte | 2.11e-20 | 9 |
CD14-positive, CD16-positive monocyte | 2.11e-20 | 9 |
blood cell | 6.02e-17 | 11 |
myeloid cell | 2.31e-14 | 108 |
common myeloid progenitor | 2.31e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.30e-10 | 66 |
granulocyte monocyte progenitor cell | 1.87e-10 | 67 |
hematopoietic lineage restricted progenitor cell | 8.92e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.22e-09 | 76 |
bone element | 1.53e-08 | 82 |
skeletal element | 8.88e-08 | 90 |
immune system | 1.59e-07 | 93 |
hematopoietic system | 3.90e-07 | 98 |
blood island | 3.90e-07 | 98 |
skeletal system | 5.44e-07 | 100 |