FFCP PHASE1:Hg19::chr20:54987084..54987106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57091 | |EntrezGene=entrezgene:57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=15878 | |HGNC=HGNC:15878 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9NQ75,B4DII4 | |UniProt=uniprot:Q9NQ75,uniprot:B4DII4 | ||
|association_with_transcript=-61bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | |association_with_transcript=-61bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | ||
|cluster_id=chr20:54987084..54987106,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_9_at_CASS4_5end | |description=CAGE_peak_9_at_CASS4_5end |
Revision as of 15:37, 28 July 2015
Short description: | p9@CASS4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CASS4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -61bp_to_ENST00000360314, NM_001164116, uc002xxp.2_5end |
EntrezGene: | 57091 |
HGNC: | 15878 |
UniProt: | Q9NQ75B4DII4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@CASS4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.05e-123 | 5 |
basophil mast progenitor cell | 8.05e-123 | 5 |
endocrine cell | 1.51e-68 | 9 |
eosinophil | 4.00e-50 | 2 |
secretory cell | 1.75e-17 | 36 |
myeloid leukocyte | 1.14e-16 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
granulocyte | 2.20e-13 | 8 |
blood cell | 5.29e-10 | 11 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-08 | 76 |
bone element | 1.03e-07 | 82 |
skeletal element | 4.76e-07 | 90 |
immune system | 7.92e-07 | 93 |
Showing 1 to 4 of 4 entries