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FFCP PHASE1:Hg19::chr20:54987084..54987106,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=57091
|EntrezGene=entrezgene:57091
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=15878
|HGNC=HGNC:15878
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=Q9NQ75,B4DII4
|UniProt=uniprot:Q9NQ75,uniprot:B4DII4
|association_with_transcript=-61bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end
|association_with_transcript=-61bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end
|cluster_id=chr20:54987084..54987106,+
|coexpression_cluster_id=C17
|coexpression_cluster_id=C17
|description=CAGE_peak_9_at_CASS4_5end
|description=CAGE_peak_9_at_CASS4_5end

Revision as of 15:37, 28 July 2015

Short description:p9@CASS4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_9_at_CASS4_5end
Coexpression cluster:C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage
Association with transcript: -61bp_to_ENST00000360314, NM_001164116, uc002xxp.2_5end
EntrezGene:57091
HGNC: 15878
UniProt: Q9NQ75B4DII4
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data