FFCP PHASE1:Hg19::chr21:38121766..38121769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:38121766..38121769,+ to FFCP PHASE1:Hg19::chr21:38121766..38121769,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:38121766..38121769,+ | |||
|coexpression_cluster_id=C2512 | |||
|description=CAGE_peak_at_chr21:38121766..38121769,+ | |||
|id=chr21:38121766..38121769,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.09e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002539;7.13e-11;10!CL:0002379;1.97e-07;1!CL:0000359;6.46e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,7.05e-11,10;CL:0002379,1.80e-07,1;CL:0000359,7.17e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.59e-20!143;DOID:305!4.64e-17!106;DOID:162!6.29e-15!235;DOID:14566!4.13e-14!239;DOID:1749!2.99e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.16e-08;1!DOID:4549;6.16e-08;1!DOID:5861;6.16e-08;1!DOID:6496;6.16e-08;1!DOID:3571;7.02e-08;1!DOID:3620;1.97e-07;1!DOID:3565;1.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.37e-08,1;DOID:4549,6.37e-08,1;DOID:5861,6.37e-08,1;DOID:6496,6.37e-08,1;DOID:3571,7.26e-08,1;DOID:3620,1.80e-07,1;DOID:3565,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.05e-12!238;UBERON:0009142!1.05e-12!238;UBERON:0005177!1.09e-09!107;UBERON:0000481!2.37e-08!347;UBERON:0002100!2.62e-08!216;UBERON:0002113!2.64e-07!27;UBERON:0003918!2.64e-07!27;UBERON:0005095!2.64e-07!27;UBERON:0007687!2.64e-07!27;UBERON:0004905!5.12e-07!5;UBERON:0000982!5.12e-07!5;UBERON:0004770!5.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;7.13e-11;10!UBERON:0004695;7.13e-11;10!UBERON:0002111;7.13e-11;10!UBERON:0004178;7.13e-11;10!UBERON:0004573;1.26e-08;33!UBERON:0004571;1.26e-08;33!UBERON:0000947;1.12e-07;21!UBERON:0010191;1.12e-07;21!UBERON:0000941;1.97e-07;1!UBERON:0001785;1.97e-07;1!UBERON:0002464;1.97e-07;1!UBERON:0004904;1.97e-07;1!UBERON:0001021;1.97e-07;1!UBERON:0001135;2.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,7.05e-11,10;UBERON:0004695,7.05e-11,10;UBERON:0002111,7.05e-11,10;UBERON:0004178,7.05e-11,10;UBERON:0004573,6.97e-09,33;UBERON:0004571,6.97e-09,33;UBERON:0000947,1.11e-07,21;UBERON:0010191,1.11e-07,21;UBERON:0000941,1.58e-07,1;UBERON:0001785,1.58e-07,1;UBERON:0002464,1.58e-07,1;UBERON:0004904,1.58e-07,1;UBERON:0001021,1.58e-07,1;UBERON:0003902,1.58e-07,1;UBERON:0005425,1.58e-07,1;UBERON:0001135,2.85e-07,15;UBERON:0001637,8.69e-07,42;UBERON:0003509,8.69e-07,42;UBERON:0004572,8.69e-07,42;UBERON:0003914,9.42e-07,117 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,10.0848771967766,8.43772339233568,8.76372108464848,4.87932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40597972162702,0,0,0,0,5.33744978648525,1.97334038733728,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0.168584690078102,0.241011029883482,0.55146986366197,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,2.92278449306521,0.422206515571503,0,0,0.215915916102139,0,0,0,0.509752546090077,0,1.56712328305525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0.74129687641568,0,0,0,0,1.27948895655667,0.42793898803392,0,0,0,0,0,1.61745985258653,0,0.421258456238981,0,5.84912375115083,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0.227586896570999,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.557694977114413,0.153900517007594,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0.234264445725339,0,0.782658475728359,0.242780379534093,0,0,0,0,0.60129367765797,0.518440956986236,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0.284609546029793,0,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,0.290268993867255,0.65780385377567,0.164230914106418,0.290967049465258,4.23629408119201,0,0.137041924646751,0.397429223405979,0,0.195551382734803,0.160317640503067,0,0,0.72045208577053,0,0,0,0.869767748958028,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,3.24269895188163,0,0.0787831823072236,0,0.0674035438541849,0.78741985211799,0,0,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0.105600336519406,0.717149357331379,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,1.03498604992744,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0.192619830407303,0.214441591374926,2.08795433572169,0.226705925512272,0,0.97894681802587,0.358177682162975,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,1.06287460050841,0.123935764259002,0,2.54403480522735,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.0981477185010256,0.235939446695481,0.550285795565037,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.527613733078862,0,0,0,0.606965604236632,0,0,0,0,0,0,0,2.44709084162552,0.156986185701028,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.782988022584546,0.588901401691458,0.609589624911347,0,0.205325613712494,1.1598144313382,0.485710993059139,0,2.38740930193642,0.237840181555137,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0.829169439458779,0,0.426467963801962,0.23806443146374,0,0,0,0,0,0.435433495793923,1.02669990325584,0.5388164241167,0.0717222053926763,0.665320713092027,0.0814032686109745,0.426909383510862,3.8614456457388,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,10.0848771967766,8.43772339233568,8.76372108464848,4.87932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40597972162702,0,0,0,0,5.33744978648525,1.97334038733728,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72082757233402,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0.168584690078102,0.241011029883482,0.55146986366197,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.40101294060657,0.184161977871793,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,2.92278449306521,0.422206515571503,0,0,0.215915916102139,0,0,0,0.509752546090077,0,1.56712328305525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0.74129687641568,0,0,0,0,1.27948895655667,0.42793898803392,0,0,0,0,0,1.61745985258653,0,0.421258456238981,0,5.84912375115083,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0.227586896570999,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.557694977114413,0.153900517007594,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.417687798021821,0,0,0.234264445725339,0,0.782658475728359,0.242780379534093,0,0,0,0,0.60129367765797,0.518440956986236,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0.284609546029793,0,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,0.290268993867255,0.65780385377567,0.164230914106418,0.290967049465258,4.23629408119201,0,0.137041924646751,0.397429223405979,0,0.195551382734803,0.160317640503067,0,0,0.72045208577053,0,0,0,0.869767748958028,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,3.24269895188163,0,0.0787831823072236,0,0.0674035438541849,0.78741985211799,0,0,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0.105600336519406,0.717149357331379,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0.314108192500469,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,1.03498604992744,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0.192619830407303,0.214441591374926,2.08795433572169,0.226705925512272,0,0.97894681802587,0.358177682162975,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,1.06287460050841,0.123935764259002,0,2.54403480522735,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0.0981477185010256,0.235939446695481,0.550285795565037,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.527613733078862,0,0,0,0.606965604236632,0,0,0,0,0,0,0,2.44709084162552,0.156986185701028,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.782988022584546,0.588901401691458,0.609589624911347,0,0.205325613712494,1.1598144313382,0.485710993059139,0,2.38740930193642,0.237840181555137,0.79062257427272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0.829169439458779,0,0.426467963801962,0.23806443146374,0,0,0,0,0,0.435433495793923,1.02669990325584,0.5388164241167,0.0717222053926763,0.665320713092027,0.0814032686109745,0.426909383510862,3.8614456457388,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr21:38121766..38121769,+ | |||
}} | }} |
Latest revision as of 17:42, 28 July 2015
Short description: | p@chr21:38121766..38121769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:38121766..38121769, + |
Coexpression cluster: | C2512_Aortic_CD14_Fibroblast_Smooth_extraskeletal_tridermal_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 7.05e-11 | 10 |
meningothelial cell | 1.80e-07 | 1 |
vascular associated smooth muscle cell | 7.17e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 7.05e-11 | 10 |
arterial system smooth muscle | 7.05e-11 | 10 |
artery smooth muscle tissue | 7.05e-11 | 10 |
aorta smooth muscle tissue | 7.05e-11 | 10 |
systemic artery | 6.97e-09 | 33 |
systemic arterial system | 6.97e-09 | 33 |
aorta | 1.11e-07 | 21 |
aortic system | 1.11e-07 | 21 |
cranial nerve II | 1.58e-07 | 1 |
cranial nerve | 1.58e-07 | 1 |
nerve trunk | 1.58e-07 | 1 |
nerve connecting eye with brain | 1.58e-07 | 1 |
nerve | 1.58e-07 | 1 |
retinal neural layer | 1.58e-07 | 1 |
presumptive neural retina | 1.58e-07 | 1 |
smooth muscle tissue | 2.85e-07 | 15 |
artery | 8.69e-07 | 42 |
arterial blood vessel | 8.69e-07 | 42 |
arterial system | 8.69e-07 | 42 |
epithelial tube | 9.42e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.37e-08 | 1 |
extraosseous chondrosarcoma | 6.37e-08 | 1 |
myxoid chondrosarcoma | 6.37e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 6.37e-08 | 1 |
liver cancer | 7.26e-08 | 1 |
central nervous system cancer | 1.80e-07 | 1 |
meningioma | 1.80e-07 | 1 |