FFCP PHASE1:Hg19::chr22:37484097..37484139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37484097..37484139,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr22:37484097..37484139,- | |description=CAGE_peak_at_chr22:37484097..37484139,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0001014!6.32e-13!2;CL:0001016!6.32e-13!2;CL:0000453!3.89e-11!5;CL:0000080!4.30e-10!6 | |ontology_enrichment_celltype=CL:0001014!6.32e-13!2;CL:0001016!6.32e-13!2;CL:0000453!3.89e-11!5;CL:0000080!4.30e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.43e-12;2!CL:0001016;3.43e-12;2 | |ontology_enrichment_celltype_v019=CL:0001014;3.43e-12;2!CL:0001016;3.43e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.24e-12,2;CL:0001016,3.24e-12,2;CL:0000988,1.06e-07,177;CL:0000838,3.87e-07,52;CL:0000542,5.21e-07,53;CL:0000051,5.21e-07,53 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!1.36e-07!1;DOID:0060061!1.36e-07!1;DOID:8691!1.36e-07!1;DOID:630!2.23e-07!1;DOID:0050177!2.23e-07!1;DOID:0050427!2.23e-07!1;DOID:5093!5.05e-07!4;DOID:1612!5.05e-07!4;DOID:12603!5.19e-07!1 | |ontology_enrichment_disease=DOID:0060060!1.36e-07!1;DOID:0060061!1.36e-07!1;DOID:8691!1.36e-07!1;DOID:630!2.23e-07!1;DOID:0050177!2.23e-07!1;DOID:0050427!2.23e-07!1;DOID:5093!5.05e-07!4;DOID:1612!5.05e-07!4;DOID:12603!5.19e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.28e-23;1!DOID:0060061;3.28e-23;1!DOID:8691;3.28e-23;1!DOID:0060058;1.03e-09;10 | |ontology_enrichment_disease_v019=DOID:0060060;3.28e-23;1!DOID:0060061;3.28e-23;1!DOID:8691;3.28e-23;1!DOID:0060058;1.03e-09;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.28e-23,1;DOID:0060061,3.28e-23,1;DOID:8691,3.28e-23,1;DOID:0060058,1.05e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007029!2.67e-07!1 | |ontology_enrichment_uberon=UBERON:0007029!2.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.82e-21;10!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000478;4.86e-09;24!UBERON:0000922;1.11e-07;49!UBERON:0002390;5.34e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;9.82e-21;10!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000478;4.86e-09;24!UBERON:0000922;1.11e-07;49!UBERON:0002390;5.34e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.82e-21,10;UBERON:0000358,9.82e-21,10;UBERON:0000307,9.82e-21,10;UBERON:0000091,9.82e-21,10;UBERON:0000087,9.82e-21,10;UBERON:0007010,9.82e-21,10;UBERON:0007806,9.82e-21,10;UBERON:0008780,9.82e-21,10;UBERON:0005728,9.82e-21,10;UBERON:0000178,4.52e-14,15;UBERON:0000179,4.52e-14,15;UBERON:0000463,4.52e-14,15;UBERON:0000478,4.86e-09,24 | |||
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|short_description=p@chr22:37484097..37484139,- | |short_description=p@chr22:37484097..37484139,- | ||
}} | }} |
Latest revision as of 20:53, 28 July 2015
Short description: | p@chr22:37484097..37484139, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37484097..37484139, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.24e-12 | 2 |
immature CD1a-positive Langerhans cell | 3.24e-12 | 2 |
hematopoietic cell | 1.06e-07 | 177 |
lymphoid lineage restricted progenitor cell | 3.87e-07 | 52 |
lymphocyte | 5.21e-07 | 53 |
common lymphoid progenitor | 5.21e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.82e-21 | 10 |
blastocyst | 9.82e-21 | 10 |
blastula | 9.82e-21 | 10 |
bilaminar disc | 9.82e-21 | 10 |
inner cell mass | 9.82e-21 | 10 |
cleaving embryo | 9.82e-21 | 10 |
connecting stalk | 9.82e-21 | 10 |
inner cell mass derived epiblast | 9.82e-21 | 10 |
extraembryonic mesoderm | 9.82e-21 | 10 |
blood | 4.52e-14 | 15 |
haemolymphatic fluid | 4.52e-14 | 15 |
organism substance | 4.52e-14 | 15 |
extraembryonic structure | 4.86e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.28e-23 | 1 |
cutaneous T cell lymphoma | 3.28e-23 | 1 |
mycosis fungoides | 3.28e-23 | 1 |
lymphoma | 1.05e-09 | 10 |