FFCP PHASE1:Hg19::chr2:119731986..119731993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:119731986..119731993,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr2:119731986..119731993,+ | |description=CAGE_peak_at_chr2:119731986..119731993,+ | ||
|id=chr2:119731986..119731993,+ | |id=chr2:119731986..119731993,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.35e-58!63;CL:0000576!2.35e-58!63;CL:0000040!2.35e-58!63;CL:0000559!2.35e-58!63;CL:0002009!2.46e-56!65;CL:0000839!8.75e-52!70;CL:0000557!5.97e-51!71;CL:0000766!4.19e-47!76;CL:0002057!2.14e-43!42;CL:0000860!4.22e-40!45;CL:0000763!1.77e-31!112;CL:0000049!1.77e-31!112;CL:0002087!3.86e-29!119;CL:0002031!1.22e-27!124;CL:0000738!1.49e-23!140;CL:0002032!4.13e-20!165;CL:0000837!4.13e-20!165;CL:0000037!5.92e-19!172;CL:0000566!5.92e-19!172;CL:0000988!1.85e-17!182;CL:0002619!4.74e-12!3;CL:0000235!5.77e-10!10;CL:0000134!2.79e-07!358;CL:0002320!5.61e-07!365 | |ontology_enrichment_celltype=CL:0002194!2.35e-58!63;CL:0000576!2.35e-58!63;CL:0000040!2.35e-58!63;CL:0000559!2.35e-58!63;CL:0002009!2.46e-56!65;CL:0000839!8.75e-52!70;CL:0000557!5.97e-51!71;CL:0000766!4.19e-47!76;CL:0002057!2.14e-43!42;CL:0000860!4.22e-40!45;CL:0000763!1.77e-31!112;CL:0000049!1.77e-31!112;CL:0002087!3.86e-29!119;CL:0002031!1.22e-27!124;CL:0000738!1.49e-23!140;CL:0002032!4.13e-20!165;CL:0000837!4.13e-20!165;CL:0000037!5.92e-19!172;CL:0000566!5.92e-19!172;CL:0000988!1.85e-17!182;CL:0002619!4.74e-12!3;CL:0000235!5.77e-10!10;CL:0000134!2.79e-07!358;CL:0002320!5.61e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.64e-53;6!CL:0000473;1.26e-40;39!CL:0000234;1.26e-40;39!CL:0000860;7.43e-20;33!CL:0002057;7.43e-20;33!CL:0000766;2.36e-14;69!CL:0000576;1.96e-11;48!CL:0000763;2.22e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.54e-53,6;CL:0000473,1.12e-40,48;CL:0000234,1.12e-40,48;CL:0002194,1.68e-32,59;CL:0000576,1.68e-32,59;CL:0000040,1.68e-32,59;CL:0000559,1.68e-32,59;CL:0002009,1.91e-31,61;CL:0000839,4.41e-29,66;CL:0000557,1.19e-28,67;CL:0000766,1.14e-26,72;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0000860,7.15e-17,42;CL:0002057,7.15e-17,42;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.59e-14;42!CL:0000049;4.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.28e-44!80;UBERON:0001474!9.72e-41!86;UBERON:0004765!8.48e-36!101;UBERON:0001434!8.48e-36!101;UBERON:0002390!3.96e-33!102;UBERON:0003061!3.96e-33!102;UBERON:0002193!1.81e-29!112;UBERON:0002405!1.71e-28!115;UBERON:0002204!2.31e-21!167;UBERON:0003081!1.82e-13!216;UBERON:0003127!4.22e-08!2;UBERON:0000926!5.03e-08!448;UBERON:0004120!5.03e-08!448;UBERON:0006603!5.03e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-25,76;UBERON:0001474,2.01e-23,82;UBERON:0004765,2.46e-21,90;UBERON:0002405,1.21e-20,93;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001434,3.44e-19,100;UBERON:0002193,9.38e-18,108;UBERON:0002204,2.30e-11,167;UBERON:0003081,2.88e-09,203 | |||
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| ||
|short_description=p@chr2:119731986..119731993,+ | |short_description=p@chr2:119731986..119731993,+ | ||
}} | }} |
Latest revision as of 23:51, 28 July 2015
Short description: | p@chr2:119731986..119731993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:119731986..119731993, + |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.54e-53 | 6 |
defensive cell | 1.12e-40 | 48 |
phagocyte | 1.12e-40 | 48 |
monopoietic cell | 1.68e-32 | 59 |
monocyte | 1.68e-32 | 59 |
monoblast | 1.68e-32 | 59 |
promonocyte | 1.68e-32 | 59 |
macrophage dendritic cell progenitor | 1.91e-31 | 61 |
myeloid lineage restricted progenitor cell | 4.41e-29 | 66 |
granulocyte monocyte progenitor cell | 1.19e-28 | 67 |
myeloid leukocyte | 1.14e-26 | 72 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
classical monocyte | 7.15e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.15e-17 | 42 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-25 | 76 |
bone element | 2.01e-23 | 82 |
skeletal element | 2.46e-21 | 90 |
immune system | 1.21e-20 | 93 |
hematopoietic system | 1.39e-19 | 98 |
blood island | 1.39e-19 | 98 |
skeletal system | 3.44e-19 | 100 |
hemolymphoid system | 9.38e-18 | 108 |
musculoskeletal system | 2.30e-11 | 167 |
lateral plate mesoderm | 2.88e-09 | 203 |