FFCP PHASE1:Hg19::chr2:157189464..157189474,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:157189464..157189474,+ | |||
|coexpression_cluster_id=C1672 | |||
|description=CAGE_peak_at_chr2:157189464..157189474,+ | |||
|id=chr2:157189464..157189474,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.32e-31!45;CL:0002057!9.12e-31!42;CL:0000766!3.56e-23!76;CL:0000839!2.35e-19!70;CL:0000738!4.45e-19!140;CL:0000557!8.17e-19!71;CL:0002194!1.32e-18!63;CL:0000576!1.32e-18!63;CL:0000040!1.32e-18!63;CL:0000559!1.32e-18!63;CL:0002009!1.70e-17!65;CL:0002087!4.15e-17!119;CL:0002031!2.60e-16!124;CL:0000037!3.18e-14!172;CL:0000566!3.18e-14!172;CL:0002032!5.80e-14!165;CL:0000837!5.80e-14!165;CL:0000763!6.15e-14!112;CL:0000049!6.15e-14!112;CL:0000988!1.60e-13!182;CL:0002393!3.38e-07!9;CL:0002397!3.38e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.19e-40;33!CL:0002057;9.19e-40;33!CL:0000473;5.86e-28;39!CL:0000234;5.86e-28;39!CL:0000576;2.17e-23;48!CL:0000766;5.89e-19;69!CL:0000763;1.55e-08;100!CL:0002087;2.35e-08;104!CL:0000097;6.99e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.83e-44,42;CL:0002057,7.83e-44,42;CL:0000473,1.31e-37,48;CL:0000234,1.31e-37,48;CL:0000766,1.61e-35,72;CL:0000839,2.46e-33,66;CL:0000557,9.55e-33,67;CL:0002194,6.63e-29,59;CL:0000576,6.63e-29,59;CL:0000040,6.63e-29,59;CL:0000559,6.63e-29,59;CL:0002009,8.78e-28,61;CL:0000738,3.08e-23,136;CL:0000763,3.13e-23,108;CL:0000049,3.13e-23,108;CL:0002031,7.00e-22,120;CL:0002087,1.94e-19,115;CL:0000037,1.20e-18,168;CL:0002032,1.86e-18,161;CL:0000837,1.86e-18,161;CL:0000988,2.72e-17,177;CL:0000097,6.94e-08,5;CL:0002028,6.94e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-34;42!UBERON:0006215;1.11e-11;3!CL:0000049;8.11e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.30e-18!102;UBERON:0003061!2.30e-18!102;UBERON:0002371!2.50e-17!80;UBERON:0001474!1.60e-16!86;UBERON:0002193!8.04e-16!112;UBERON:0004765!1.15e-13!101;UBERON:0001434!1.15e-13!101;UBERON:0007023!6.12e-12!115;UBERON:0002405!2.33e-10!115;UBERON:0001049!3.19e-07!57;UBERON:0005068!3.19e-07!57;UBERON:0006241!3.19e-07!57;UBERON:0007135!3.19e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.16e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.83e-28,76;UBERON:0001474,1.25e-25,82;UBERON:0002390,4.78e-24,98;UBERON:0003061,4.78e-24,98;UBERON:0004765,8.45e-23,90;UBERON:0002405,7.30e-22,93;UBERON:0002193,3.36e-21,108;UBERON:0001434,6.76e-20,100;UBERON:0002204,2.06e-11,167;UBERON:0003081,5.57e-10,203;UBERON:0000007,7.87e-09,2;UBERON:0000926,7.36e-07,315;UBERON:0004120,7.36e-07,315;UBERON:0006603,7.36e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0.377875943688809,0.970336244751265,3.0215774797739,2.46700732813095,6.50383378879718,4.89077066947656,3.58624989140741,1.18241114944293,5.5159308917859,9.68227025375739,6.77132432971709,3.01187743268168,1.63743690034707,1.57306439111559,6.42776173978895,0.962787081228281,5.11469700639233,0.659702600373432,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,7.28621129244555,3.12889751052121,2.6062661364614,0.605399502633369,1.10483290796269,1.26584954976354,0.845021145247767,1.06302149982522,1.04829322754188,1.90958672949042,0.450530678524519,0.16072558669708,1.42506371870624,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,2.27685187643779,2.93618594685469,1.52909291250092,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0.946895611469467,1.94826728407911,0.222820913770347,1.47302953737419,0.443067789167242,0,0.640456598628376,0.130059347559878,0.164437904603676,0,0.289803085735052,0.741432815810302,0.802622484269139,0,0,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0,0.821127996921047,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,2.69526550203004,2.16179930125442,6.81709140502452,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,1.42636905040718,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,1.30139853857622,0.773288812777695,0,0.637938751653163,2.24702107184155,0,0.828831026872071,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,1.39203086947621,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0.437299999980979,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,1.52581736317083,1.43753037910592,1.18219047581419,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0.889563386041866,0.123563938946503,0.313265848516366,0.943615861729479,0.802577647298789,0.234264445725339,0,0.19566461893209,0,1.97292201424695,0,0.30607276163049,0.189559738885464,0.450970258243478,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0.174118413160805,0.34945333648406,0,0.0967563312890851,0.219267951258557,0.492692742319255,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.837847203816763,1.3749625440701,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.544813624446302,0,0.275078873194468,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.533937062838473,0.628817220398664,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.221858103073705,0.248385611765534,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0.936669811613763,0.579684114443301,0,0.467426619694449,0,0.378806010550178,0.50313580350515,0,0,0.302461847526478,0,0.443565449968902,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.32007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| |||
|short_description=p@chr2:157189464..157189474,+ | |||
}} |
Latest revision as of 01:34, 29 July 2015
Short description: | p@chr2:157189464..157189474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:157189464..157189474, + |
Coexpression cluster: | C1672_seminal_CD14_Mast_CD34_immature_mesenchymal_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.83e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.83e-44 | 42 |
defensive cell | 1.31e-37 | 48 |
phagocyte | 1.31e-37 | 48 |
myeloid leukocyte | 1.61e-35 | 72 |
myeloid lineage restricted progenitor cell | 2.46e-33 | 66 |
granulocyte monocyte progenitor cell | 9.55e-33 | 67 |
monopoietic cell | 6.63e-29 | 59 |
monocyte | 6.63e-29 | 59 |
monoblast | 6.63e-29 | 59 |
promonocyte | 6.63e-29 | 59 |
macrophage dendritic cell progenitor | 8.78e-28 | 61 |
leukocyte | 3.08e-23 | 136 |
myeloid cell | 3.13e-23 | 108 |
common myeloid progenitor | 3.13e-23 | 108 |
hematopoietic lineage restricted progenitor cell | 7.00e-22 | 120 |
nongranular leukocyte | 1.94e-19 | 115 |
hematopoietic stem cell | 1.20e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.86e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-18 | 161 |
hematopoietic cell | 2.72e-17 | 177 |
mast cell | 6.94e-08 | 5 |
basophil mast progenitor cell | 6.94e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.83e-28 | 76 |
bone element | 1.25e-25 | 82 |
hematopoietic system | 4.78e-24 | 98 |
blood island | 4.78e-24 | 98 |
skeletal element | 8.45e-23 | 90 |
immune system | 7.30e-22 | 93 |
hemolymphoid system | 3.36e-21 | 108 |
skeletal system | 6.76e-20 | 100 |
musculoskeletal system | 2.06e-11 | 167 |
lateral plate mesoderm | 5.57e-10 | 203 |
pituitary gland | 7.87e-09 | 2 |
mesoderm | 7.36e-07 | 315 |
mesoderm-derived structure | 7.36e-07 | 315 |
presumptive mesoderm | 7.36e-07 | 315 |