FFCP PHASE1:Hg19::chr2:18479067..18479081,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:18479067..18479081,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr2:18479067..18479081,+ | |description=CAGE_peak_at_chr2:18479067..18479081,+ | ||
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|ontology_enrichment_celltype=CL:0000071!1.01e-25!18;CL:0002546!1.01e-25!18;CL:0002139!5.68e-24!24;CL:0000115!2.28e-19!35;CL:1000413!1.01e-17!9;CL:0002078!2.25e-14!44;CL:0000213!4.29e-14!57;CL:0000215!4.29e-14!57;CL:0000076!1.93e-12!62;CL:0000222!6.58e-12!119;CL:0002543!2.72e-11!6;CL:0002544!7.47e-11!6;CL:0002594!8.04e-11!4;CL:0000220!3.21e-09!246;CL:0002321!4.67e-09!248;CL:0002618!1.01e-08!3 | |ontology_enrichment_celltype=CL:0000071!1.01e-25!18;CL:0002546!1.01e-25!18;CL:0002139!5.68e-24!24;CL:0000115!2.28e-19!35;CL:1000413!1.01e-17!9;CL:0002078!2.25e-14!44;CL:0000213!4.29e-14!57;CL:0000215!4.29e-14!57;CL:0000076!1.93e-12!62;CL:0000222!6.58e-12!119;CL:0002543!2.72e-11!6;CL:0002544!7.47e-11!6;CL:0002594!8.04e-11!4;CL:0000220!3.21e-09!246;CL:0002321!4.67e-09!248;CL:0002618!1.01e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.09e-31;18!CL:0002543;9.10e-25;6!CL:0002139;3.33e-23;24!CL:1000413;3.23e-16;9!CL:0000115;5.16e-15;36!CL:0002618;3.57e-13;3!CL:0002078;1.12e-11;45!CL:0002568;9.38e-11;1!CL:0000222;1.37e-10;1!CL:0002594;2.68e-10;4!CL:0002557;2.87e-10;1!CL:0000306;7.15e-10;4!CL:0002222;7.15e-10;4!CL:0002224;7.15e-10;4!CL:0000213;3.88e-07;58!CL:0000215;3.88e-07;58!CL:0002544;7.30e-07;6 | |ontology_enrichment_celltype_v019=CL:0000071;3.09e-31;18!CL:0002543;9.10e-25;6!CL:0002139;3.33e-23;24!CL:1000413;3.23e-16;9!CL:0000115;5.16e-15;36!CL:0002618;3.57e-13;3!CL:0002078;1.12e-11;45!CL:0002568;9.38e-11;1!CL:0000222;1.37e-10;1!CL:0002594;2.68e-10;4!CL:0002557;2.87e-10;1!CL:0000306;7.15e-10;4!CL:0002222;7.15e-10;4!CL:0002224;7.15e-10;4!CL:0000213;3.88e-07;58!CL:0000215;3.88e-07;58!CL:0002544;7.30e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.20e-31,18;CL:0002546,2.20e-31,18;CL:0002543,7.36e-25,6;CL:0002139,2.59e-23,24;CL:0000115,3.12e-19,36;CL:1000413,2.65e-16,9;CL:0002078,3.85e-15,45;CL:0002618,2.63e-13,3;CL:0000222,2.09e-12,121;CL:0000213,1.81e-11,58;CL:0000215,1.81e-11,58;CL:0002568,9.84e-11,1;CL:0002594,2.75e-10,4;CL:0002557,3.61e-10,1;CL:0000306,8.19e-10,4;CL:0002222,8.19e-10,4;CL:0002224,8.19e-10,4;CL:0000076,2.85e-08,63;CL:0002321,1.14e-07,250;CL:0002544,5.75e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.09e-31;18 | |ontology_enrichment_development_v019=CL:0002546;3.09e-31;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.01e-25!18;UBERON:0004638!1.01e-25!18;UBERON:0004852!1.01e-25!18;UBERON:0000487!2.49e-20!22;UBERON:0001981!7.73e-20!60;UBERON:0007500!7.73e-20!60;UBERON:0004537!7.73e-20!60;UBERON:0006965!7.73e-20!60;UBERON:0000055!1.87e-19!69;UBERON:0002049!5.13e-19!79;UBERON:0007798!5.13e-19!79;UBERON:0003915!1.01e-17!9;UBERON:0004700!1.01e-17!9;UBERON:0001917!1.01e-17!9;UBERON:0006914!1.99e-17!25;UBERON:0004872!6.82e-16!84;UBERON:0001637!5.98e-15!42;UBERON:0003509!5.98e-15!42;UBERON:0004572!5.98e-15!42;UBERON:0004535!1.62e-13!110;UBERON:0001009!6.17e-13!113;UBERON:0003914!4.98e-11!118;UBERON:0001310!8.04e-11!4;UBERON:0000483!1.09e-09!309;UBERON:0000119!1.80e-09!312;UBERON:0000025!2.47e-09!194;UBERON:0004111!1.77e-08!241;UBERON:0000490!1.20e-07!138;UBERON:0001638!2.38e-07!9;UBERON:0003920!2.38e-07!9;UBERON:0004582!2.38e-07!9 | |ontology_enrichment_uberon=UBERON:0001986!1.01e-25!18;UBERON:0004638!1.01e-25!18;UBERON:0004852!1.01e-25!18;UBERON:0000487!2.49e-20!22;UBERON:0001981!7.73e-20!60;UBERON:0007500!7.73e-20!60;UBERON:0004537!7.73e-20!60;UBERON:0006965!7.73e-20!60;UBERON:0000055!1.87e-19!69;UBERON:0002049!5.13e-19!79;UBERON:0007798!5.13e-19!79;UBERON:0003915!1.01e-17!9;UBERON:0004700!1.01e-17!9;UBERON:0001917!1.01e-17!9;UBERON:0006914!1.99e-17!25;UBERON:0004872!6.82e-16!84;UBERON:0001637!5.98e-15!42;UBERON:0003509!5.98e-15!42;UBERON:0004572!5.98e-15!42;UBERON:0004535!1.62e-13!110;UBERON:0001009!6.17e-13!113;UBERON:0003914!4.98e-11!118;UBERON:0001310!8.04e-11!4;UBERON:0000483!1.09e-09!309;UBERON:0000119!1.80e-09!312;UBERON:0000025!2.47e-09!194;UBERON:0004111!1.77e-08!241;UBERON:0000490!1.20e-07!138;UBERON:0001638!2.38e-07!9;UBERON:0003920!2.38e-07!9;UBERON:0004582!2.38e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.09e-31;18!UBERON:0001986;3.09e-31;18!UBERON:0004852;3.09e-31;18!UBERON:0000487;2.14e-25;22!UBERON:0000490;2.17e-23;33!UBERON:0006914;3.07e-22;25!UBERON:0010260;1.16e-16;9!UBERON:0001638;1.31e-16;9!UBERON:0003920;1.31e-16;9!UBERON:0004582;1.31e-16;9!UBERON:0003915;3.23e-16;9!UBERON:0004700;3.23e-16;9!UBERON:0001917;3.23e-16;9!UBERON:0007500;1.79e-12;56!UBERON:0001981;1.79e-12;56!UBERON:0004537;1.79e-12;56!UBERON:0002049;3.70e-11;75!UBERON:0007798;3.70e-11;75!UBERON:0001310;2.68e-10;4!UBERON:0010077;7.15e-10;4!UBERON:0005389;7.15e-10;4!UBERON:0000484;7.15e-10;4!UBERON:0000965;7.15e-10;4!UBERON:0001803;7.15e-10;4!UBERON:0000055;1.65e-09;65!UBERON:0001637;7.59e-09;42!UBERON:0003509;7.59e-09;42!UBERON:0004572;7.59e-09;42!UBERON:0002066;2.94e-08;5!UBERON:0003914;2.35e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.09e-31;18!UBERON:0001986;3.09e-31;18!UBERON:0004852;3.09e-31;18!UBERON:0000487;2.14e-25;22!UBERON:0000490;2.17e-23;33!UBERON:0006914;3.07e-22;25!UBERON:0010260;1.16e-16;9!UBERON:0001638;1.31e-16;9!UBERON:0003920;1.31e-16;9!UBERON:0004582;1.31e-16;9!UBERON:0003915;3.23e-16;9!UBERON:0004700;3.23e-16;9!UBERON:0001917;3.23e-16;9!UBERON:0007500;1.79e-12;56!UBERON:0001981;1.79e-12;56!UBERON:0004537;1.79e-12;56!UBERON:0002049;3.70e-11;75!UBERON:0007798;3.70e-11;75!UBERON:0001310;2.68e-10;4!UBERON:0010077;7.15e-10;4!UBERON:0005389;7.15e-10;4!UBERON:0000484;7.15e-10;4!UBERON:0000965;7.15e-10;4!UBERON:0001803;7.15e-10;4!UBERON:0000055;1.65e-09;65!UBERON:0001637;7.59e-09;42!UBERON:0003509;7.59e-09;42!UBERON:0004572;7.59e-09;42!UBERON:0002066;2.94e-08;5!UBERON:0003914;2.35e-07;74 | ||
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|short_description=p@chr2:18479067..18479081,+ | |short_description=p@chr2:18479067..18479081,+ | ||
}} | }} |
Latest revision as of 04:05, 29 July 2015
Short description: | p@chr2:18479067..18479081, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:18479067..18479081, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.20e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.20e-31 | 18 |
vein endothelial cell | 7.36e-25 | 6 |
endothelial cell of vascular tree | 2.59e-23 | 24 |
endothelial cell | 3.12e-19 | 36 |
endothelial cell of artery | 2.65e-16 | 9 |
meso-epithelial cell | 3.85e-15 | 45 |
endothelial cell of umbilical vein | 2.63e-13 | 3 |
mesodermal cell | 2.09e-12 | 121 |
lining cell | 1.81e-11 | 58 |
barrier cell | 1.81e-11 | 58 |
mesenchymal stem cell of Wharton's jelly | 9.84e-11 | 1 |
smooth muscle cell of the umbilical artery | 2.75e-10 | 4 |
fibroblast of pulmonary artery | 3.61e-10 | 1 |
crystallin accumulating cell | 8.19e-10 | 4 |
vertebrate lens cell | 8.19e-10 | 4 |
lens epithelial cell | 8.19e-10 | 4 |
squamous epithelial cell | 2.85e-08 | 63 |
embryonic cell | 1.14e-07 | 250 |
aortic endothelial cell | 5.75e-07 | 6 |