FFCP PHASE1:Hg19::chr2:189859488..189859525,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189859488..189859525,- | |||
|coexpression_cluster_id=C1051 | |coexpression_cluster_id=C1051 | ||
|description=CAGE_peak_at_chr2:189859488..189859525,- | |description=CAGE_peak_at_chr2:189859488..189859525,- |
Latest revision as of 04:15, 29 July 2015
Short description: | p@chr2:189859488..189859525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189859488..189859525, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:189859488..189859525- |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.07e-21 | 76 |
muscle cell | 5.32e-16 | 55 |
muscle precursor cell | 2.23e-15 | 58 |
myoblast | 2.23e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-15 | 58 |
multi fate stem cell | 9.26e-15 | 427 |
somatic stem cell | 5.63e-14 | 433 |
electrically responsive cell | 3.41e-13 | 61 |
electrically active cell | 3.41e-13 | 61 |
stem cell | 5.65e-13 | 441 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.07e-16 | 62 |
striated muscle tissue | 6.07e-16 | 62 |
myotome | 6.07e-16 | 62 |
dense mesenchyme tissue | 1.19e-15 | 73 |
somite | 1.44e-15 | 71 |
presomitic mesoderm | 1.44e-15 | 71 |
presumptive segmental plate | 1.44e-15 | 71 |
dermomyotome | 1.44e-15 | 71 |
trunk paraxial mesoderm | 1.44e-15 | 71 |
paraxial mesoderm | 3.77e-15 | 72 |
Showing 1 to 10 of 40 entries