FFCP PHASE1:Hg19::chr2:227662613..227662634,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:227662613..227662634,+
|short_description=p@chr2:227662613..227662634,+
|description=CAGE_peak_at_chr2:227662613..227662634,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:227662613..227662634,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr2:227662613..227662634,+ | |||
|id=chr2:227662613..227662634,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;4.11e-14;5!CL:0002195;1.51e-09;2!CL:0002571;1.51e-09;2!CL:0000349;2.11e-08;19!CL:0002541;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,5.36e-14,5;CL:0002195,1.57e-09,2;CL:0002571,1.57e-09,2;CL:0000349,2.56e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.70e-18;4!DOID:1612;7.70e-18;4!DOID:0060084;8.86e-07;3!DOID:127;8.86e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.39e-18,4;DOID:1612,7.39e-18,4;DOID:0060084,7.28e-07,3;DOID:127,7.28e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.07e-15;10!UBERON:0000158;2.07e-15;10!UBERON:0000305;2.35e-10;7!UBERON:0000310;1.07e-07;10!UBERON:0001443;4.50e-07;11!UBERON:0003124;8.86e-07;3!UBERON:0000920;8.86e-07;3!UBERON:0000478;9.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.44e-11,14;UBERON:0000158,4.44e-11,14;UBERON:0000305,2.83e-10,7;UBERON:0004871,4.19e-09,8;UBERON:0000310,1.05e-07,10;UBERON:0008835,2.36e-07,22;UBERON:0003894,2.36e-07,22;UBERON:0001443,4.43e-07,11;UBERON:0009854,4.68e-07,23 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.896692083310806,0,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,1.10825646193673,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,15.8040879591855,6.86788929675898,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.366277859273374,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07842021376792,0,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0.213452994739353,0.39961921916426,0,6.64312257762311,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,1.63293680054705,0,0,7.66746098034398,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.363697318405119,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.638812138197976,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.12729431655633,0.606351566874658,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,0,0.366724332548599,0,0.665756774185513,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.896692083310806,0,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,1.10825646193673,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,15.8040879591855,6.86788929675898,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.366277859273374,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07842021376792,0,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0.213452994739353,0.39961921916426,0,6.64312257762311,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,1.63293680054705,0,0,7.66746098034398,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.363697318405119,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.638812138197976,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.12729431655633,0.606351566874658,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,0,0.366724332548599,0,0.665756774185513,0,0 | ||
|short_description=p@chr2:227662613..227662634,+ | |||
}} | }} |
Latest revision as of 07:19, 29 July 2015
Short description: | p@chr2:227662613..227662634, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:227662613..227662634, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 5.36e-14 | 5 |
hepatic stem cell | 1.57e-09 | 2 |
hepatic mesenchymal stem cell | 1.57e-09 | 2 |
extraembryonic cell | 2.56e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.44e-11 | 14 |
membranous layer | 4.44e-11 | 14 |
amnion | 2.83e-10 | 7 |
somatic layer of lateral plate mesoderm | 4.19e-09 | 8 |
breast | 1.05e-07 | 10 |
hepatic diverticulum | 2.36e-07 | 22 |
liver primordium | 2.36e-07 | 22 |
chest | 4.43e-07 | 11 |
digestive tract diverticulum | 4.68e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.39e-18 | 4 |
breast cancer | 7.39e-18 | 4 |
cell type benign neoplasm | 7.28e-07 | 3 |
leiomyoma | 7.28e-07 | 3 |