FFCP PHASE1:Hg19::chr2:238187300..238187323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238187300..238187323,- | |||
|description=CAGE_peak_at_chr2:238187300..238187323,- | |description=CAGE_peak_at_chr2:238187300..238187323,- | ||
|id=chr2:238187300..238187323,- | |id=chr2:238187300..238187323,- | ||
|ontology_enrichment_celltype=CL:0002620!4.05e-26!23;CL:0000057!1.64e-25!75;CL:0000055!1.84e-20!180;CL:0002570!2.15e-10!8;CL:0000188!3.65e-10!9;CL:0002540!2.39e-07!6 | |ontology_enrichment_celltype=CL:0002620!4.05e-26!23;CL:0000057!1.64e-25!75;CL:0000055!1.84e-20!180;CL:0002570!2.15e-10!8;CL:0000188!3.65e-10!9;CL:0002540!2.39e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.76e-20;23!CL:0000135;2.25e-16;3!CL:0000388;2.25e-16;3!CL:0002570;4.30e-16;8!CL:0002540;3.46e-14;6!CL:0002092;1.53e-08;10!CL:0000594;1.04e-07;3!CL:0000723;2.44e-07;61 | |ontology_enrichment_celltype_v019=CL:0002620;9.76e-20;23!CL:0000135;2.25e-16;3!CL:0000388;2.25e-16;3!CL:0002570;4.30e-16;8!CL:0002540;3.46e-14;6!CL:0002092;1.53e-08;10!CL:0000594;1.04e-07;3!CL:0000723;2.44e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.62e-20,23;CL:0000057,1.93e-17,76;CL:0000135,1.57e-16,3;CL:0000388,1.57e-16,3;CL:0002570,6.01e-16,8;CL:0002540,3.79e-14,6;CL:0002092,1.61e-08,10;CL:0000048,3.30e-08,427;CL:0000723,5.42e-08,433;CL:0000134,5.89e-08,354;CL:0000594,8.34e-08,3;CL:0000034,1.03e-07,441;CL:0002320,1.13e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!2.18e-09!5;DOID:450!2.18e-09!5;DOID:66!2.18e-09!5;DOID:423!2.18e-09!5;DOID:0080000!2.18e-09!5;DOID:11722!2.18e-09!5 | |ontology_enrichment_disease=DOID:17!2.18e-09!5;DOID:450!2.18e-09!5;DOID:66!2.18e-09!5;DOID:423!2.18e-09!5;DOID:0080000!2.18e-09!5;DOID:11722!2.18e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.52e-25;5!DOID:450;4.52e-25;5!DOID:66;4.52e-25;5!DOID:423;4.52e-25;5!DOID:0080000;4.52e-25;5!DOID:11722;4.52e-25;5 | |ontology_enrichment_disease_v019=DOID:17;4.52e-25;5!DOID:450;4.52e-25;5!DOID:66;4.52e-25;5!DOID:423;4.52e-25;5!DOID:0080000;4.52e-25;5!DOID:11722;4.52e-25;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.55e-25,5;DOID:450,2.55e-25,5;DOID:66,2.55e-25,5;DOID:423,2.55e-25,5;DOID:0080000,2.55e-25,5;DOID:11722,2.55e-25,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.08e-17!45;UBERON:0002416!2.08e-17!45;UBERON:0002097!2.11e-15!40;UBERON:0003102!1.66e-13!95;UBERON:0001013!1.43e-08!14;UBERON:0000914!5.98e-08!83;UBERON:0002329!5.98e-08!83;UBERON:0003077!5.98e-08!83;UBERON:0003059!5.98e-08!83;UBERON:0007282!5.98e-08!83;UBERON:0009618!5.98e-08!83;UBERON:0007285!5.98e-08!83;UBERON:0004290!6.02e-07!70 | |ontology_enrichment_uberon=UBERON:0002199!2.08e-17!45;UBERON:0002416!2.08e-17!45;UBERON:0002097!2.11e-15!40;UBERON:0003102!1.66e-13!95;UBERON:0001013!1.43e-08!14;UBERON:0000914!5.98e-08!83;UBERON:0002329!5.98e-08!83;UBERON:0003077!5.98e-08!83;UBERON:0003059!5.98e-08!83;UBERON:0007282!5.98e-08!83;UBERON:0009618!5.98e-08!83;UBERON:0007285!5.98e-08!83;UBERON:0004290!6.02e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.25e-16;3!UBERON:0000043;2.25e-16;3!UBERON:0007845;2.25e-16;3!UBERON:0002097;3.07e-10;41!UBERON:0002199;1.74e-09;46!UBERON:0002416;1.74e-09;46!UBERON:0001013;4.41e-09;14!UBERON:0003102;3.65e-07;50!UBERON:0002371;4.00e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0007846;2.25e-16;3!UBERON:0000043;2.25e-16;3!UBERON:0007845;2.25e-16;3!UBERON:0002097;3.07e-10;41!UBERON:0002199;1.74e-09;46!UBERON:0002416;1.74e-09;46!UBERON:0001013;4.41e-09;14!UBERON:0003102;3.65e-07;50!UBERON:0002371;4.00e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.57e-16,3;UBERON:0000043,1.57e-16,3;UBERON:0007845,1.57e-16,3;UBERON:0002199,3.01e-13,46;UBERON:0002416,3.01e-13,46;UBERON:0002097,1.25e-12,41;UBERON:0001013,5.30e-09,14;UBERON:0004145,1.48e-07,3;UBERON:0002384,2.75e-07,371;UBERON:0004797,3.45e-07,7;UBERON:0003102,6.17e-07,99 | |||
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| ||
|short_description=p@chr2:238187300..238187323,- | |short_description=p@chr2:238187300..238187323,- | ||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238187300..238187323, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238187300..238187323, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.62e-20 | 23 |
fibroblast | 1.93e-17 | 76 |
fibrocyte | 1.57e-16 | 3 |
tendon cell | 1.57e-16 | 3 |
mesenchymal stem cell of adipose | 6.01e-16 | 8 |
mesenchymal stem cell of the bone marrow | 3.79e-14 | 6 |
bone marrow cell | 1.61e-08 | 10 |
multi fate stem cell | 3.30e-08 | 427 |
somatic stem cell | 5.42e-08 | 433 |
mesenchymal cell | 5.89e-08 | 354 |
skeletal muscle satellite cell | 8.34e-08 | 3 |
stem cell | 1.03e-07 | 441 |
connective tissue cell | 1.13e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.57e-16 | 3 |
tendon | 1.57e-16 | 3 |
regular connective tissue | 1.57e-16 | 3 |
integument | 3.01e-13 | 46 |
integumental system | 3.01e-13 | 46 |
skin of body | 1.25e-12 | 41 |
adipose tissue | 5.30e-09 | 14 |
outflow tract | 1.48e-07 | 3 |
connective tissue | 2.75e-07 | 371 |
blood vessel layer | 3.45e-07 | 7 |
surface structure | 6.17e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.55e-25 | 5 |
myotonic disease | 2.55e-25 | 5 |
muscle tissue disease | 2.55e-25 | 5 |
myopathy | 2.55e-25 | 5 |
muscular disease | 2.55e-25 | 5 |
myotonic dystrophy | 2.55e-25 | 5 |