FFCP PHASE1:Hg19::chr2:238233200..238233214,-: Difference between revisions
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|id=chr2:238233200..238233214,-
|short_description=p@chr2:238233200..238233214,-
|description=CAGE_peak_at_chr2:238233200..238233214,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238233200..238233214,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238233200..238233214,- | |||
|id=chr2:238233200..238233214,- | |||
|ontology_enrichment_celltype=CL:0000055!2.22e-31!180;CL:0000057!3.32e-26!75;CL:0000048!2.90e-15!430;CL:0000723!2.26e-14!436;CL:0002620!2.88e-13!23;CL:0000034!3.09e-13!444;CL:0000183!1.22e-10!59;CL:0002320!1.56e-10!365;CL:0000680!1.92e-10!57;CL:0000056!1.92e-10!57;CL:0000355!1.92e-10!57;CL:0000187!5.60e-10!54;CL:0000134!1.99e-08!358;CL:0002371!2.45e-08!591;CL:0002570!4.06e-08!8;CL:0000393!6.45e-08!60;CL:0000211!6.45e-08!60;CL:0000192!4.56e-07!42;CL:0000514!4.56e-07!42;CL:0000499!6.25e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000723;2.26e-10;61!CL:0000134;8.98e-10;55!CL:0002620;1.16e-09;23!CL:0002570;1.25e-09;8!CL:0000499;4.25e-09;28!CL:0000048;1.00e-08;58!CL:0000034;1.00e-07;69!CL:0000057;1.97e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.03e-16,76;CL:0000048,7.74e-14,427;CL:0000723,3.06e-13,433;CL:0000034,1.79e-12,441;CL:0002320,5.14e-12,361;CL:0002620,1.09e-09,23;CL:0000134,1.34e-09,354;CL:0002570,1.47e-09,8;CL:0000499,3.04e-09,28;CL:0000219,1.09e-07,386;CL:0000153,9.95e-07,9;CL:0000447,9.95e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.05e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.85e-07;5!DOID:450;1.85e-07;5!DOID:66;1.85e-07;5!DOID:423;1.85e-07;5!DOID:0080000;1.85e-07;5!DOID:11722;1.85e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.43e-07,5;DOID:450,1.43e-07,5;DOID:66,1.43e-07,5;DOID:423,1.43e-07,5;DOID:0080000,1.43e-07,5;DOID:11722,1.43e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.80e-15!83;UBERON:0002329!6.80e-15!83;UBERON:0003077!6.80e-15!83;UBERON:0003059!6.80e-15!83;UBERON:0007282!6.80e-15!83;UBERON:0009618!6.80e-15!83;UBERON:0007285!6.80e-15!83;UBERON:0004290!3.63e-14!70;UBERON:0000486!5.08e-12!82;UBERON:0002384!6.42e-12!375;UBERON:0001134!6.49e-12!61;UBERON:0002036!6.49e-12!61;UBERON:0003082!6.49e-12!61;UBERON:0002385!7.32e-12!63;UBERON:0001015!7.32e-12!63;UBERON:0000383!7.32e-12!63;UBERON:0003102!4.49e-10!95;UBERON:0002199!5.91e-10!45;UBERON:0002416!5.91e-10!45;UBERON:0002097!3.01e-08!40;UBERON:0005256!7.40e-08!143;UBERON:0001013!1.49e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.35e-09;198!UBERON:0002199;8.91e-08;46!UBERON:0002416;8.91e-08;46!UBERON:0001134;1.62e-07;16!UBERON:0002036;1.62e-07;16!UBERON:0002097;4.47e-07;41!UBERON:0002385;6.05e-07;31!UBERON:0001015;6.05e-07;31!UBERON:0000383;6.05e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.26e-12,371;UBERON:0002199,3.48e-10,46;UBERON:0002416,3.48e-10,46;UBERON:0003102,6.66e-09,99;UBERON:0002097,1.58e-08,41;UBERON:0007524,1.54e-07,73;UBERON:0002329,4.20e-07,71;UBERON:0003059,4.20e-07,71;UBERON:0007282,4.20e-07,71;UBERON:0004290,4.20e-07,71;UBERON:0009618,4.20e-07,71;UBERON:0003077,6.52e-07,72;UBERON:0007285,6.52e-07,72 | |||
|phase1_expression=1.09007027562334,2.99740733447376,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0.631719873426831,1.82829939739887,0.245733936501509,0,0,0.791300934685361,1.73272894144065,2.31978163009541,0,0.602694528023977,1.46062018077475,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,2.00535164254356,3.0417768981773,1.5905718941022,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.51956613997496,0.397227542439656,11.7603014507014,2.4826786753885,0,1.06748995729705,0.98667019366864,0.311211035399766,1.48181739276657,0.490385709340376,1.21085942115945,6.33793516927999,0.468642863667593,2.49728061464256,1.1409436430889,3.88566569434683,0.23486899728753,0.323745888736263,0.140450806702248,1.42907919878425,1.35117749042945,1.03325781175765,3.56400857184616,1.48360157567134,0,0,1.17835279767846,0.500474079487857,0,0,0.30648779579902,0.901428353439581,0.567160915800105,9.50765069150968,2.77624605464138,1.48352330811693,9.30282397861647,1.33968288009971,4.89517026086695,2.04728541964749,4.21940830603166,0.779496041289589,6.56327813034698,1.47279837827679,0.323292113637624,13.1353549231147,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0,0,0,0,9.64861407289328,0,3.71494342425583,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0.87192013766656,0.2933531432838,0.387815147273333,3.57656445851882,6.762422020448,1.32969058292435,2.08014873822732,1.02882949704857,0,0.799266537048298,1.28680194292333,2.71310802695722,0.823240336780769,0.65147236858747,2.48774364119782,0.791951872933429,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,1.01346914667305,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,3.00102312635806,2.17012018959788,1.45579603071565,1.07057393278297,1.10391690523754,0.702848489956279,0.902838299183157,2.27407504055985,1.03473071292505,1.99267679560631,1.47495334833363,1.21637060255316,1.37060810223918,3.43143423810856,0,0,0,0,0,0,0.744323423456331,0.306923946576125,3.36792113319688,0.256278298511402,0.511707249066704,0.64341568457443,0,3.08419387605311,6.74734556189883,0.657017248110473,2.07701771673448,2.32420756919918,0,0,0,1.83703117063371,4.55227920016793,3.8026080338233,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45006077438183,1.07834031980251,2.91656981979646,0.551346289938122,2.14840489736547,3.62541734785571,1.96021243057032,1.95870478422822,0,0,0,0,0,14.7961803010401,0,0,0.532306030317022,1.73986598415015,0.37064843820784,0.429374660225974,1.116475108079,0.316379424718726,0.190630193923825,1.02359116524534,8.13084077264449,0.318203247925937,0.78494864019923,1.2591072030832,0.823611089208164,1.17812402345686,0.202182481573316,0,0,0,0,0,1.63799893689583,4.94919011837995,1.13008116620243,0,0,0,1.73632660280006,2.62357900818653,0.202910376962704,0.6196469961995,0.845086807596724,0.286822704408103,0.392996164052485,0,0.354761064070598,1.47775344708365,3.29294892959902,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,1.15362711958732,0,0.398495976502139,0.276283915531148,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,1.37588825977293,0,0,0,0.193978032976839,0,0,1.78154502040776,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,1.83596791745379,0,0,0,0,0,0,0,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0.542999601753713,3.45688596480507,3.91904832131291,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,3.28360566351123,6.54397267572229,4.43844689202091,3.03044808440143,10.3142839718556,5.33886732957922,2.74608082076308,3.93200401784422,2.64243240990727,1.18284119991707,1.11507737014592,0.899606224327209,1.39736661188633,1.65882483136342,9.30446000952982,3.65221543268214,0.601030435988874,1.14241563650639,1.22061219961398,1.45478927362048,0.644463342254931,0.928067519756987,2.3885753321917,0,2.06037423109676,5.72474130902062,1.26184898228651,0,0,0,0,1.85217979459067,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0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| ||
|short_description=p@chr2:238233200..238233214,- | |||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238233200..238233214, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238233200..238233214, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.03e-16 | 76 |
multi fate stem cell | 7.74e-14 | 427 |
somatic stem cell | 3.06e-13 | 433 |
stem cell | 1.79e-12 | 441 |
connective tissue cell | 5.14e-12 | 361 |
skin fibroblast | 1.09e-09 | 23 |
mesenchymal cell | 1.34e-09 | 354 |
mesenchymal stem cell of adipose | 1.47e-09 | 8 |
stromal cell | 3.04e-09 | 28 |
motile cell | 1.09e-07 | 386 |
GAG secreting cell | 9.95e-07 | 9 |
carbohydrate secreting cell | 9.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.26e-12 | 371 |
integument | 3.48e-10 | 46 |
integumental system | 3.48e-10 | 46 |
surface structure | 6.66e-09 | 99 |
skin of body | 1.58e-08 | 41 |
dense mesenchyme tissue | 1.54e-07 | 73 |
somite | 4.20e-07 | 71 |
presomitic mesoderm | 4.20e-07 | 71 |
presumptive segmental plate | 4.20e-07 | 71 |
dermomyotome | 4.20e-07 | 71 |
trunk paraxial mesoderm | 4.20e-07 | 71 |
paraxial mesoderm | 6.52e-07 | 72 |
presumptive paraxial mesoderm | 6.52e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.43e-07 | 5 |
myotonic disease | 1.43e-07 | 5 |
muscle tissue disease | 1.43e-07 | 5 |
myopathy | 1.43e-07 | 5 |
muscular disease | 1.43e-07 | 5 |
myotonic dystrophy | 1.43e-07 | 5 |