FFCP PHASE1:Hg19::chr2:240497949..240497953,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:240497949..240497953,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr2:240497949..240497953,+ | |description=CAGE_peak_at_chr2:240497949..240497953,+ | ||
|id=chr2:240497949..240497953,+ | |id=chr2:240497949..240497953,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.44e-50!42;CL:0000860!9.25e-46!45;CL:0000557!4.16e-35!71;CL:0000839!1.21e-33!70;CL:0000766!2.78e-33!76;CL:0002009!7.25e-32!65;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0000763!5.53e-29!112;CL:0000049!5.53e-29!112;CL:0000738!1.47e-23!140;CL:0002031!6.34e-21!124;CL:0000037!9.53e-20!172;CL:0000566!9.53e-20!172;CL:0002032!1.21e-19!165;CL:0000837!1.21e-19!165;CL:0000988!1.35e-17!182;CL:0002087!3.06e-15!119;CL:0000453!1.86e-07!5 | |ontology_enrichment_celltype=CL:0002057!4.44e-50!42;CL:0000860!9.25e-46!45;CL:0000557!4.16e-35!71;CL:0000839!1.21e-33!70;CL:0000766!2.78e-33!76;CL:0002009!7.25e-32!65;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0000763!5.53e-29!112;CL:0000049!5.53e-29!112;CL:0000738!1.47e-23!140;CL:0002031!6.34e-21!124;CL:0000037!9.53e-20!172;CL:0000566!9.53e-20!172;CL:0002032!1.21e-19!165;CL:0000837!1.21e-19!165;CL:0000988!1.35e-17!182;CL:0002087!3.06e-15!119;CL:0000453!1.86e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-80;33!CL:0002057;6.02e-80;33!CL:0000473;3.41e-58;39!CL:0000234;3.41e-58;39!CL:0000576;4.22e-38;48!CL:0000766;4.16e-26;69!CL:0000763;3.38e-13;100!CL:0000097;6.53e-10;5!CL:0002087;8.18e-10;104!CL:0000738;9.78e-09;136!CL:0001014;7.87e-07;2!CL:0001016;7.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-71,42;CL:0002057,1.35e-71,42;CL:0000473,2.36e-65,48;CL:0000234,2.36e-65,48;CL:0000557,5.25e-62,67;CL:0000839,1.55e-56,66;CL:0002009,8.03e-55,61;CL:0000766,5.48e-54,72;CL:0002194,1.90e-50,59;CL:0000576,1.90e-50,59;CL:0000040,1.90e-50,59;CL:0000559,1.90e-50,59;CL:0000763,5.77e-41,108;CL:0000049,5.77e-41,108;CL:0002031,4.44e-34,120;CL:0000738,3.11e-32,136;CL:0002032,5.49e-27,161;CL:0000837,5.49e-27,161;CL:0000037,2.07e-25,168;CL:0002087,5.37e-25,115;CL:0000988,1.45e-23,177;CL:0000097,6.27e-10,5;CL:0002028,6.27e-10,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.63e-52;42!CL:0000049;7.22e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.09e-29!80;UBERON:0001474!2.77e-26!86;UBERON:0004765!2.51e-22!101;UBERON:0001434!2.51e-22!101;UBERON:0002390!5.61e-21!102;UBERON:0003061!5.61e-21!102;UBERON:0002193!1.09e-18!112;UBERON:0002405!8.23e-18!115;UBERON:0002204!8.90e-11!167;UBERON:0001737!3.54e-09!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-53,76;UBERON:0001474,6.43e-49,82;UBERON:0002405,2.55e-44,93;UBERON:0004765,1.05e-43,90;UBERON:0002390,1.51e-41,98;UBERON:0003061,1.51e-41,98;UBERON:0001434,2.36e-38,100;UBERON:0002193,9.01e-37,108;UBERON:0002204,1.61e-21,167;UBERON:0003081,6.90e-16,203;UBERON:0000926,2.18e-07,315;UBERON:0004120,2.18e-07,315;UBERON:0006603,2.18e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,2.18097358169347,3.40088349319928,4.60909716256851,2.32429036905685,1.6446715520873,2.16794459626573,1.43846196161075,3.58624989140741,3.31075121844019,0.689491361473237,3.22742341791913,2.70852973188684,1.50593871634084,2.72906150057846,2.24723484445085,1.53041946185451,2.24650318953266,3.19668562899521,1.64925650093358,2.59302754908121,2.55734850319616,2.90209238628584,2.8369261234557,4.35975574296902,1.50749199154046,0.521482918420201,3.47502151528187,2.42159801053347,2.20966581592539,1.89877432464531,0.633765858935825,0.425208599930087,0.838634582033504,2.3589012540764,2.70318407114711,1.92870704036496,0.285012743741249,0.99458338599545,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,1.67186495390678,0,0.473447805734733,3.89653456815823,1.22551502573691,2.3568472597987,1.99380505125259,2.43723477388514,0.768547918354051,0.520237390239513,1.31550323682941,0.276350017785848,2.02862160014537,1.77943875794473,1.87278579662799,3.1360657141493,1.92625882585863,1.14966148080576,0.68725489096526,1.51811815211702,0,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0.504641701751257,1.09493207722749,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.939269553886573,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.850650583454319,0,0,0,0,1.40877494421162,1.86595303986695,2.01767934783746,1.64115163454294,0.380987365753014,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0.324621940274555,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0.886068179966986,0.488105059607853,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.829412415681711,0,0.521745061811734,0,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.664324201566815,1.4720885483026,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34323429584154,0,0,0,0,0,0,0,0.535701835878287,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,2.18097358169347,3.40088349319928,4.60909716256851,2.32429036905685,1.6446715520873,2.16794459626573,1.43846196161075,3.58624989140741,3.31075121844019,0.689491361473237,3.22742341791913,2.70852973188684,1.50593871634084,2.72906150057846,2.24723484445085,1.53041946185451,2.24650318953266,3.19668562899521,1.64925650093358,2.59302754908121,2.55734850319616,2.90209238628584,2.8369261234557,4.35975574296902,1.50749199154046,0.521482918420201,3.47502151528187,2.42159801053347,2.20966581592539,1.89877432464531,0.633765858935825,0.425208599930087,0.838634582033504,2.3589012540764,2.70318407114711,1.92870704036496,0.285012743741249,0.99458338599545,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,1.67186495390678,0,0.473447805734733,3.89653456815823,1.22551502573691,2.3568472597987,1.99380505125259,2.43723477388514,0.768547918354051,0.520237390239513,1.31550323682941,0.276350017785848,2.02862160014537,1.77943875794473,1.87278579662799,3.1360657141493,1.92625882585863,1.14966148080576,0.68725489096526,1.51811815211702,0,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0.504641701751257,1.09493207722749,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.939269553886573,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.850650583454319,0,0,0,0,1.40877494421162,1.86595303986695,2.01767934783746,1.64115163454294,0.380987365753014,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0.324621940274555,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0.886068179966986,0.488105059607853,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0.829412415681711,0,0.521745061811734,0,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.664324201566815,1.4720885483026,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34323429584154,0,0,0,0,0,0,0,0.535701835878287,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:240497949..240497953,+ | |short_description=p@chr2:240497949..240497953,+ | ||
}} | }} |
Latest revision as of 08:25, 29 July 2015
Short description: | p@chr2:240497949..240497953, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240497949..240497953, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-71 | 42 |
defensive cell | 2.36e-65 | 48 |
phagocyte | 2.36e-65 | 48 |
granulocyte monocyte progenitor cell | 5.25e-62 | 67 |
myeloid lineage restricted progenitor cell | 1.55e-56 | 66 |
macrophage dendritic cell progenitor | 8.03e-55 | 61 |
myeloid leukocyte | 5.48e-54 | 72 |
monopoietic cell | 1.90e-50 | 59 |
monocyte | 1.90e-50 | 59 |
monoblast | 1.90e-50 | 59 |
promonocyte | 1.90e-50 | 59 |
myeloid cell | 5.77e-41 | 108 |
common myeloid progenitor | 5.77e-41 | 108 |
hematopoietic lineage restricted progenitor cell | 4.44e-34 | 120 |
leukocyte | 3.11e-32 | 136 |
hematopoietic oligopotent progenitor cell | 5.49e-27 | 161 |
hematopoietic multipotent progenitor cell | 5.49e-27 | 161 |
hematopoietic stem cell | 2.07e-25 | 168 |
nongranular leukocyte | 5.37e-25 | 115 |
hematopoietic cell | 1.45e-23 | 177 |
mast cell | 6.27e-10 | 5 |
basophil mast progenitor cell | 6.27e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-53 | 76 |
bone element | 6.43e-49 | 82 |
immune system | 2.55e-44 | 93 |
skeletal element | 1.05e-43 | 90 |
hematopoietic system | 1.51e-41 | 98 |
blood island | 1.51e-41 | 98 |
skeletal system | 2.36e-38 | 100 |
hemolymphoid system | 9.01e-37 | 108 |
musculoskeletal system | 1.61e-21 | 167 |
lateral plate mesoderm | 6.90e-16 | 203 |
mesoderm | 2.18e-07 | 315 |
mesoderm-derived structure | 2.18e-07 | 315 |
presumptive mesoderm | 2.18e-07 | 315 |