FFCP PHASE1:Hg19::chr2:28571261..28571277,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28571261..28571277,+ | |||
|coexpression_cluster_id=C578 | |||
|description=CAGE_peak_at_chr2:28571261..28571277,+ | |description=CAGE_peak_at_chr2:28571261..28571277,+ | ||
|id=chr2:28571261..28571277,+ | |id=chr2:28571261..28571277,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.62e-33!140;CL:0000037!1.34e-32!172;CL:0000566!1.34e-32!172;CL:0000988!8.01e-30!182;CL:0002032!1.32e-27!165;CL:0000837!1.32e-27!165;CL:0000791!3.37e-23!18;CL:0000789!3.37e-23!18;CL:0002420!3.37e-23!18;CL:0002419!3.37e-23!18;CL:0000790!3.37e-23!18;CL:0002087!1.46e-22!119;CL:0002031!7.63e-21!124;CL:0000625!6.59e-18!11;CL:0000763!1.25e-17!112;CL:0000049!1.25e-17!112;CL:0000084!1.63e-17!25;CL:0000827!1.63e-17!25;CL:0002057!1.96e-17!42;CL:0000860!7.51e-16!45;CL:0000766!2.02e-15!76;CL:0000557!5.42e-13!71;CL:0002009!3.86e-11!65;CL:0000839!8.44e-11!70;CL:0002194!1.96e-10!63;CL:0000576!1.96e-10!63;CL:0000040!1.96e-10!63;CL:0000559!1.96e-10!63;CL:0000838!9.45e-10!52;CL:0002393!1.74e-09!9;CL:0002397!1.74e-09!9;CL:0000542!1.80e-09!53;CL:0000051!1.80e-09!53;CL:0000624!1.34e-08!6;CL:0000134!1.78e-08!358;CL:0002320!5.16e-08!365;CL:0000623!5.23e-08!3;CL:0000825!5.23e-08!3;CL:0000842!1.07e-07!3;CL:0000767!1.15e-07!3;CL:0000453!1.21e-07!5;CL:0000094!8.14e-07!8;CL:0000898!9.12e-07!3 | |ontology_enrichment_celltype=CL:0000738!3.62e-33!140;CL:0000037!1.34e-32!172;CL:0000566!1.34e-32!172;CL:0000988!8.01e-30!182;CL:0002032!1.32e-27!165;CL:0000837!1.32e-27!165;CL:0000791!3.37e-23!18;CL:0000789!3.37e-23!18;CL:0002420!3.37e-23!18;CL:0002419!3.37e-23!18;CL:0000790!3.37e-23!18;CL:0002087!1.46e-22!119;CL:0002031!7.63e-21!124;CL:0000625!6.59e-18!11;CL:0000763!1.25e-17!112;CL:0000049!1.25e-17!112;CL:0000084!1.63e-17!25;CL:0000827!1.63e-17!25;CL:0002057!1.96e-17!42;CL:0000860!7.51e-16!45;CL:0000766!2.02e-15!76;CL:0000557!5.42e-13!71;CL:0002009!3.86e-11!65;CL:0000839!8.44e-11!70;CL:0002194!1.96e-10!63;CL:0000576!1.96e-10!63;CL:0000040!1.96e-10!63;CL:0000559!1.96e-10!63;CL:0000838!9.45e-10!52;CL:0002393!1.74e-09!9;CL:0002397!1.74e-09!9;CL:0000542!1.80e-09!53;CL:0000051!1.80e-09!53;CL:0000624!1.34e-08!6;CL:0000134!1.78e-08!358;CL:0002320!5.16e-08!365;CL:0000623!5.23e-08!3;CL:0000825!5.23e-08!3;CL:0000842!1.07e-07!3;CL:0000767!1.15e-07!3;CL:0000453!1.21e-07!5;CL:0000094!8.14e-07!8;CL:0000898!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.30e-18;3!CL:0000453;2.88e-17;5!CL:0000767;6.81e-17;3!CL:0000226;1.41e-16;3!CL:0000842;1.41e-16;3!CL:0000791;1.21e-13;18!CL:0000789;1.21e-13;18!CL:0002419;1.21e-13;18!CL:0000625;3.99e-12;11!CL:0000094;4.17e-11;8!CL:0000990;1.19e-09;8!CL:0000084;1.43e-09;25!CL:0000081;4.26e-08;11!CL:0000451;6.53e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.06e-18,3;CL:0000825,9.06e-18,3;CL:0000453,1.81e-17,5;CL:0000226,5.51e-17,3;CL:0000842,5.51e-17,3;CL:0000767,6.48e-17,3;CL:0000037,1.83e-14,168;CL:0000738,3.38e-14,136;CL:0000791,1.39e-13,18;CL:0000789,1.39e-13,18;CL:0002420,1.39e-13,18;CL:0002419,1.39e-13,18;CL:0000790,1.39e-13,18;CL:0000988,1.86e-13,177;CL:0000625,4.19e-12,11;CL:0000094,3.87e-11,8;CL:0002032,5.11e-10,161;CL:0000837,5.11e-10,161;CL:0000990,9.24e-10,8;CL:0000084,1.58e-09,25;CL:0000827,1.58e-09,25;CL:0000838,1.42e-08,52;CL:0000542,2.23e-08,53;CL:0000051,2.23e-08,53;CL:0000081,4.04e-08,11;CL:0000451,5.34e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0002193!9.71e-20!112;UBERON:0002371!7.67e-12!80;UBERON:0001474!1.99e-11!86;UBERON:0000178!4.03e-10!15;UBERON:0000179!4.03e-10!15;UBERON:0000463!4.03e-10!15;UBERON:0002405!1.68e-09!115;UBERON:0004765!1.19e-08!101;UBERON:0001434!1.19e-08!101;UBERON:0002384!7.36e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-12;15!UBERON:0000179;2.90e-12;15!UBERON:0000463;2.90e-12;15!UBERON:0002390;3.95e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-12,15;UBERON:0000179,1.92e-12,15;UBERON:0000463,1.92e-12,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,1.23852898652861,0,0,0,0,0,1.17440175733939,0,0.601633342410425,1.51907609501096,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.545812300115692,0.674170453335254,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,1.12101712596307,0,0.786839080455332,0,1.23360899399706,1.17030546773475,0.32592226663359,0,0,1.22551502573691,0.883817722424512,0.886135578334485,1.08321545506006,3.45846563259323,1.95089021339817,0.822189523018381,1.10540007114339,0.289803085735052,0,0.267540828089713,0,1.13309342697566,1.14966148080576,0.68725489096526,0.759059076058509,0.637130828648193,0.651083453856419,0.950452044448374,0.301150238155546,0.76791966692651,1.24930726552346,1.18388626022008,0,4.83856183739358,4.01160293675261,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,4.52817907204986,7.82892521306465,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.72571360654893,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,0,0.476463550915578,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,0,0,0,0,0.0524545881349981,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,1.46151324344699,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,1.23852898652861,0,0,0,0,0,1.17440175733939,0,0.601633342410425,1.51907609501096,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.545812300115692,0.674170453335254,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,1.12101712596307,0,0.786839080455332,0,1.23360899399706,1.17030546773475,0.32592226663359,0,0,1.22551502573691,0.883817722424512,0.886135578334485,1.08321545506006,3.45846563259323,1.95089021339817,0.822189523018381,1.10540007114339,0.289803085735052,0,0.267540828089713,0,1.13309342697566,1.14966148080576,0.68725489096526,0.759059076058509,0.637130828648193,0.651083453856419,0.950452044448374,0.301150238155546,0.76791966692651,1.24930726552346,1.18388626022008,0,4.83856183739358,4.01160293675261,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,4.52817907204986,7.82892521306465,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.72571360654893,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29391162142713,0,0.476463550915578,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,0,0,0,0,0.0524545881349981,0,1.07572403599707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,1.46151324344699,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:28571261..28571277,+ | |short_description=p@chr2:28571261..28571277,+ | ||
}} | }} |
Latest revision as of 09:19, 29 July 2015
Short description: | p@chr2:28571261..28571277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28571261..28571277, + |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.06e-18 | 3 |
pro-NK cell | 9.06e-18 | 3 |
Langerhans cell | 1.81e-17 | 5 |
single nucleate cell | 5.51e-17 | 3 |
mononuclear cell | 5.51e-17 | 3 |
basophil | 6.48e-17 | 3 |
hematopoietic stem cell | 1.83e-14 | 168 |
leukocyte | 3.38e-14 | 136 |
mature alpha-beta T cell | 1.39e-13 | 18 |
alpha-beta T cell | 1.39e-13 | 18 |
immature T cell | 1.39e-13 | 18 |
mature T cell | 1.39e-13 | 18 |
immature alpha-beta T cell | 1.39e-13 | 18 |
hematopoietic cell | 1.86e-13 | 177 |
CD8-positive, alpha-beta T cell | 4.19e-12 | 11 |
granulocyte | 3.87e-11 | 8 |
hematopoietic oligopotent progenitor cell | 5.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-10 | 161 |
conventional dendritic cell | 9.24e-10 | 8 |
T cell | 1.58e-09 | 25 |
pro-T cell | 1.58e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.42e-08 | 52 |
lymphocyte | 2.23e-08 | 53 |
common lymphoid progenitor | 2.23e-08 | 53 |
blood cell | 4.04e-08 | 11 |
dendritic cell | 5.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-12 | 15 |
haemolymphatic fluid | 1.92e-12 | 15 |
organism substance | 1.92e-12 | 15 |