FFCP PHASE1:Hg19::chr2:75466431..75466447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:75466431..75466447,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_at_chr2:75466431..75466447,+ | |description=CAGE_peak_at_chr2:75466431..75466447,+ | ||
|id=chr2:75466431..75466447,+ | |id=chr2:75466431..75466447,+ | ||
|ontology_enrichment_celltype=CL:0002622!3.92e-12!3;CL:0000077!1.30e-11!19;CL:0000569!4.13e-09!4;CL:0000011!4.13e-09!4 | |ontology_enrichment_celltype=CL:0002622!3.92e-12!3;CL:0000077!1.30e-11!19;CL:0000569!4.13e-09!4;CL:0000011!4.13e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.66e-18;1!CL:0000511;8.72e-18;1!CL:0002625;8.72e-18;1!CL:0000216;8.72e-18;1!CL:0000159;7.97e-10;2!CL:0000054;9.06e-10;2!CL:0000137;9.06e-10;2!CL:0000092;9.06e-10;2!CL:1000415;1.44e-09;2!CL:0002622;6.32e-07;3!CL:0002592;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.66e-18,1;CL:0000511,5.26e-18,1;CL:0002625,5.26e-18,1;CL:0000216,5.26e-18,1;CL:0000159,7.98e-10,2;CL:0000054,9.46e-10,2;CL:0000137,9.46e-10,2;CL:0000092,9.46e-10,2;CL:1000415,1.57e-09,2;CL:0002622,6.14e-07,3;CL:0002592,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.22e-09;30 | |||
|ontology_enrichment_disease=DOID:2394!8.17e-16!14;DOID:120!1.42e-07!27;DOID:193!5.76e-07!29 | |ontology_enrichment_disease=DOID:2394!8.17e-16!14;DOID:120!1.42e-07!27;DOID:193!5.76e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.66e-18;1!DOID:5662;8.72e-18;1!DOID:200;9.06e-10;2!DOID:4305;9.06e-10;2!DOID:4556;8.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.66e-18,1;DOID:5662,1.22e-17,1;DOID:200,9.46e-10,2;DOID:4305,9.46e-10,2;DOID:4556,8.15e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002119!2.48e-15!4;UBERON:0004531!2.48e-15!4;UBERON:0000992!2.67e-13!13;UBERON:0000991!2.40e-10!21;UBERON:0009196!2.40e-10!21;UBERON:0009117!2.40e-10!21;UBERON:0005564!2.40e-10!21;UBERON:0004176!8.16e-10!22;UBERON:0004122!1.13e-08!15;UBERON:0002367!2.01e-08!11;UBERON:0010147!2.01e-08!11;UBERON:0009846!2.01e-08!11;UBERON:0003353!2.01e-08!11;UBERON:0004902!2.01e-08!11;UBERON:0003820!2.01e-08!11;UBERON:0009847!2.01e-08!11;UBERON:0005156!5.40e-08!59;UBERON:0000990!5.40e-08!59;UBERON:0002323!1.06e-07!46;UBERON:0003937!1.08e-07!12;UBERON:0005399!1.08e-07!12;UBERON:0002118!2.44e-07!5;UBERON:0004532!2.44e-07!5;UBERON:0004458!4.24e-07!49 | |ontology_enrichment_uberon=UBERON:0002119!2.48e-15!4;UBERON:0004531!2.48e-15!4;UBERON:0000992!2.67e-13!13;UBERON:0000991!2.40e-10!21;UBERON:0009196!2.40e-10!21;UBERON:0009117!2.40e-10!21;UBERON:0005564!2.40e-10!21;UBERON:0004176!8.16e-10!22;UBERON:0004122!1.13e-08!15;UBERON:0002367!2.01e-08!11;UBERON:0010147!2.01e-08!11;UBERON:0009846!2.01e-08!11;UBERON:0003353!2.01e-08!11;UBERON:0004902!2.01e-08!11;UBERON:0003820!2.01e-08!11;UBERON:0009847!2.01e-08!11;UBERON:0005156!5.40e-08!59;UBERON:0000990!5.40e-08!59;UBERON:0002323!1.06e-07!46;UBERON:0003937!1.08e-07!12;UBERON:0005399!1.08e-07!12;UBERON:0002118!2.44e-07!5;UBERON:0004532!2.44e-07!5;UBERON:0004458!4.24e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.72e-18;1!UBERON:0001343;8.72e-18;1!UBERON:0004910;8.72e-18;1!UBERON:0004813;8.72e-18;1!UBERON:0002294;2.24e-10;7!UBERON:0001173;2.24e-10;7!UBERON:0004909;1.44e-09;2!UBERON:0000058;1.57e-07;10!UBERON:0002110;8.62e-07;3!UBERON:0003498;8.62e-07;3!UBERON:0005985;8.62e-07;3!UBERON:0001621;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.26e-18,1;UBERON:0001343,5.26e-18,1;UBERON:0004910,5.26e-18,1;UBERON:0005154,5.26e-18,1;UBERON:0005295,5.26e-18,1;UBERON:0004813,5.26e-18,1;UBERON:0005297,5.26e-18,1;UBERON:0005294,5.26e-18,1;UBERON:0010141,5.26e-18,1;UBERON:0005891,5.26e-18,1;UBERON:0004909,1.12e-09,2;UBERON:0002294,2.55e-08,9;UBERON:0001173,2.55e-08,9;UBERON:0004912,2.55e-08,9;UBERON:0005911,4.80e-07,82;UBERON:0001621,7.70e-07,3;UBERON:0002110,9.12e-07,3;UBERON:0006242,9.12e-07,3 | |||
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| ||
|short_description=p@chr2:75466431..75466447,+ | |short_description=p@chr2:75466431..75466447,+ | ||
}} | }} |
Latest revision as of 12:25, 29 July 2015
Short description: | p@chr2:75466431..75466447, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:75466431..75466447, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.66e-18 | 1 |
androgen binding protein secreting cell | 5.26e-18 | 1 |
seminiferous tubule epithelial cell | 5.26e-18 | 1 |
Sertoli cell | 5.26e-18 | 1 |
seromucus secreting cell | 7.98e-10 | 2 |
bone matrix secreting cell | 9.46e-10 | 2 |
osteocyte | 9.46e-10 | 2 |
osteoclast | 9.46e-10 | 2 |
epithelial cell of gall bladder | 1.57e-09 | 2 |
prostate stromal cell | 6.14e-07 | 3 |
smooth muscle cell of the coronary artery | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.26e-18 | 1 |
seminiferous tubule of testis | 5.26e-18 | 1 |
epithelium of male gonad | 5.26e-18 | 1 |
epithelial cord | 5.26e-18 | 1 |
sex cord | 5.26e-18 | 1 |
seminiferous tubule epithelium | 5.26e-18 | 1 |
testis sex cord | 5.26e-18 | 1 |
genital ridge | 5.26e-18 | 1 |
primitive sex cord of indifferent gonad | 5.26e-18 | 1 |
coelomic epithelium | 5.26e-18 | 1 |
epithelium of gonad | 1.12e-09 | 2 |
biliary system | 2.55e-08 | 9 |
biliary tree | 2.55e-08 | 9 |
biliary bud | 2.55e-08 | 9 |
endo-epithelium | 4.80e-07 | 82 |
coronary artery | 7.70e-07 | 3 |
gallbladder | 9.12e-07 | 3 |
gall bladder primordium | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.66e-18 | 1 |
pleomorphic carcinoma | 1.22e-17 | 1 |
giant cell tumor | 9.46e-10 | 2 |
bone giant cell tumor | 9.46e-10 | 2 |
lung large cell carcinoma | 8.15e-07 | 3 |