FFCP PHASE1:Hg19::chr2:87053149..87053161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:87053149..87053161,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_at_chr2:87053149..87053161,- | |description=CAGE_peak_at_chr2:87053149..87053161,- | ||
|id=chr2:87053149..87053161,- | |id=chr2:87053149..87053161,- | ||
|ontology_enrichment_celltype=CL:0000625!5.16e-35!11;CL:0000084!3.29e-33!25;CL:0000827!3.29e-33!25;CL:0000791!2.58e-32!18;CL:0000789!2.58e-32!18;CL:0002420!2.58e-32!18;CL:0002419!2.58e-32!18;CL:0000790!2.58e-32!18;CL:0000838!2.33e-19!52;CL:0000542!6.84e-19!53;CL:0000051!6.84e-19!53;CL:0002087!5.63e-13!119;CL:0000738!6.19e-12!140;CL:0000842!4.04e-10!3;CL:0000623!7.18e-10!3;CL:0000825!7.18e-10!3;CL:0002031!4.62e-09!124;CL:0000037!2.29e-08!172;CL:0000566!2.29e-08!172;CL:0000224!1.12e-07!4;CL:0000988!1.59e-07!182 | |ontology_enrichment_celltype=CL:0000625!5.16e-35!11;CL:0000084!3.29e-33!25;CL:0000827!3.29e-33!25;CL:0000791!2.58e-32!18;CL:0000789!2.58e-32!18;CL:0002420!2.58e-32!18;CL:0002419!2.58e-32!18;CL:0000790!2.58e-32!18;CL:0000838!2.33e-19!52;CL:0000542!6.84e-19!53;CL:0000051!6.84e-19!53;CL:0002087!5.63e-13!119;CL:0000738!6.19e-12!140;CL:0000842!4.04e-10!3;CL:0000623!7.18e-10!3;CL:0000825!7.18e-10!3;CL:0002031!4.62e-09!124;CL:0000037!2.29e-08!172;CL:0000566!2.29e-08!172;CL:0000224!1.12e-07!4;CL:0000988!1.59e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.77e-74;11!CL:0000791;9.03e-45;18!CL:0000789;9.03e-45;18!CL:0002419;9.03e-45;18!CL:0000084;2.96e-44;25!CL:0000226;4.35e-20;3!CL:0000842;4.35e-20;3!CL:0000542;5.41e-15;53!CL:0000623;1.52e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.60e-74,11;CL:0000791,8.50e-45,18;CL:0000789,8.50e-45,18;CL:0002420,8.50e-45,18;CL:0002419,8.50e-45,18;CL:0000790,8.50e-45,18;CL:0000084,2.96e-44,25;CL:0000827,2.96e-44,25;CL:0000838,1.21e-26,52;CL:0000542,4.39e-26,53;CL:0000051,4.39e-26,53;CL:0000226,4.07e-20,3;CL:0000842,4.07e-20,3;CL:0002087,2.37e-15,115;CL:0000738,4.38e-14,136;CL:0000037,1.06e-10,168;CL:0000988,5.73e-10,177;CL:0002031,9.43e-10,120;CL:0000623,1.59e-09,3;CL:0000825,1.59e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.03e-45;18!CL:0000051;5.41e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.25e-15!15;UBERON:0000179!3.25e-15!15;UBERON:0000463!3.25e-15!15;UBERON:0007023!3.29e-12!115;UBERON:0004177!7.89e-11!7;UBERON:0002370!1.07e-07!4;UBERON:0005058!1.07e-07!4;UBERON:0009113!1.07e-07!4;UBERON:0003295!1.07e-07!4;UBERON:0005562!1.07e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.20e-20;15!UBERON:0000179;2.20e-20;15!UBERON:0000463;2.20e-20;15!UBERON:0002370;1.01e-14;2!UBERON:0005058;1.01e-14;2!UBERON:0009113;1.01e-14;2!UBERON:0002390;2.99e-13;32!UBERON:0002193;1.73e-09;42!UBERON:0000029;8.98e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.98e-20,15;UBERON:0000179,1.98e-20,15;UBERON:0000463,1.98e-20,15;UBERON:0000029,6.63e-08,1;UBERON:0002370,8.71e-08,4;UBERON:0005058,8.71e-08,4;UBERON:0009113,8.71e-08,4;UBERON:0003295,8.71e-08,4;UBERON:0005562,8.71e-08,4 | |||
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| ||
|short_description=p@chr2:87053149..87053161,- | |short_description=p@chr2:87053149..87053161,- | ||
}} | }} |
Latest revision as of 12:55, 29 July 2015
Short description: | p@chr2:87053149..87053161, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:87053149..87053161, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.60e-74 | 11 |
mature alpha-beta T cell | 8.50e-45 | 18 |
alpha-beta T cell | 8.50e-45 | 18 |
immature T cell | 8.50e-45 | 18 |
mature T cell | 8.50e-45 | 18 |
immature alpha-beta T cell | 8.50e-45 | 18 |
T cell | 2.96e-44 | 25 |
pro-T cell | 2.96e-44 | 25 |
lymphoid lineage restricted progenitor cell | 1.21e-26 | 52 |
lymphocyte | 4.39e-26 | 53 |
common lymphoid progenitor | 4.39e-26 | 53 |
single nucleate cell | 4.07e-20 | 3 |
mononuclear cell | 4.07e-20 | 3 |
nongranular leukocyte | 2.37e-15 | 115 |
leukocyte | 4.38e-14 | 136 |
hematopoietic stem cell | 1.06e-10 | 168 |
hematopoietic cell | 5.73e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 9.43e-10 | 120 |
natural killer cell | 1.59e-09 | 3 |
pro-NK cell | 1.59e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.98e-20 | 15 |
haemolymphatic fluid | 1.98e-20 | 15 |
organism substance | 1.98e-20 | 15 |
lymph node | 6.63e-08 | 1 |
thymus | 8.71e-08 | 4 |
hemolymphoid system gland | 8.71e-08 | 4 |
thymic region | 8.71e-08 | 4 |
pharyngeal gland | 8.71e-08 | 4 |
thymus primordium | 8.71e-08 | 4 |