FFCP PHASE1:Hg19::chr2:98279521..98279533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:98279521..98279533,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr2:98279521..98279533,+ | |description=CAGE_peak_at_chr2:98279521..98279533,+ | ||
|id=chr2:98279521..98279533,+ | |id=chr2:98279521..98279533,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.68e-24!42;CL:0000860!8.69e-22!45;CL:0002009!3.73e-20!65;CL:0000738!5.96e-18!140;CL:0002194!7.74e-18!63;CL:0000576!7.74e-18!63;CL:0000040!7.74e-18!63;CL:0000559!7.74e-18!63;CL:0002087!1.26e-17!119;CL:0000557!1.28e-17!71;CL:0000766!1.20e-15!76;CL:0002031!1.65e-15!124;CL:0000839!3.77e-15!70;CL:0000988!1.03e-12!182;CL:0000037!5.56e-12!172;CL:0000566!5.56e-12!172;CL:0000723!3.54e-11!436;CL:0000048!3.66e-11!430;CL:0000034!3.77e-11!444;CL:0000134!3.96e-10!358;CL:0002032!4.96e-10!165;CL:0000837!4.96e-10!165;CL:0000219!6.66e-10!390;CL:0002320!1.48e-09!365;CL:0000763!2.32e-09!112;CL:0000049!2.32e-09!112;CL:0002371!1.78e-08!591;CL:0000144!5.31e-08!625;CL:0000080!2.07e-07!6 | |ontology_enrichment_celltype=CL:0002057!5.68e-24!42;CL:0000860!8.69e-22!45;CL:0002009!3.73e-20!65;CL:0000738!5.96e-18!140;CL:0002194!7.74e-18!63;CL:0000576!7.74e-18!63;CL:0000040!7.74e-18!63;CL:0000559!7.74e-18!63;CL:0002087!1.26e-17!119;CL:0000557!1.28e-17!71;CL:0000766!1.20e-15!76;CL:0002031!1.65e-15!124;CL:0000839!3.77e-15!70;CL:0000988!1.03e-12!182;CL:0000037!5.56e-12!172;CL:0000566!5.56e-12!172;CL:0000723!3.54e-11!436;CL:0000048!3.66e-11!430;CL:0000034!3.77e-11!444;CL:0000134!3.96e-10!358;CL:0002032!4.96e-10!165;CL:0000837!4.96e-10!165;CL:0000219!6.66e-10!390;CL:0002320!1.48e-09!365;CL:0000763!2.32e-09!112;CL:0000049!2.32e-09!112;CL:0002371!1.78e-08!591;CL:0000144!5.31e-08!625;CL:0000080!2.07e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-42;33!CL:0002057;2.96e-42;33!CL:0000473;8.05e-30;39!CL:0000234;8.05e-30;39!CL:0000576;5.74e-27;48!CL:0000766;2.16e-20;69!CL:0001014;2.26e-20;2!CL:0001016;2.26e-20;2!CL:0002393;2.23e-15;6!CL:0002397;2.23e-15;6!CL:0002087;4.04e-13;104!CL:0000763;1.76e-09;100!CL:0000453;1.05e-08;5!CL:0000738;1.18e-08;136!CL:0000840;2.16e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-55,42;CL:0002057,1.54e-55,42;CL:0000473,2.61e-48,48;CL:0000234,2.61e-48,48;CL:0002009,3.51e-47,61;CL:0000557,8.52e-43,67;CL:0002194,3.53e-38,59;CL:0000576,3.53e-38,59;CL:0000040,3.53e-38,59;CL:0000559,3.53e-38,59;CL:0000839,6.10e-34,66;CL:0000766,5.92e-31,72;CL:0000763,1.01e-25,108;CL:0000049,1.01e-25,108;CL:0002031,1.05e-25,120;CL:0000738,5.40e-25,136;CL:0002087,7.69e-24,115;CL:0001014,2.26e-20,2;CL:0001016,2.26e-20,2;CL:0000037,9.89e-20,168;CL:0000988,1.37e-18,177;CL:0002032,1.68e-18,161;CL:0000837,1.68e-18,161;CL:0002393,1.90e-10,9;CL:0002397,1.90e-10,9;CL:0000453,1.05e-08,5;CL:0000134,7.93e-08,354;CL:0002320,1.29e-07,361;CL:0000840,2.16e-07,5;CL:0001029,2.16e-07,5;CL:0000219,7.25e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-37;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.27e-10;1!DOID:0060061;1.27e-10;1!DOID:8691;1.27e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.46e-10,1;DOID:0060061,1.46e-10,1;DOID:8691,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.25e-16!102;UBERON:0003061!6.25e-16!102;UBERON:0001474!8.16e-16!86;UBERON:0002371!1.11e-15!80;UBERON:0002193!2.38e-15!112;UBERON:0004765!8.81e-14!101;UBERON:0001434!8.81e-14!101;UBERON:0002405!7.83e-11!115;UBERON:0002204!5.94e-10!167;UBERON:0002384!2.71e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!6.25e-16!102;UBERON:0003061!6.25e-16!102;UBERON:0001474!8.16e-16!86;UBERON:0002371!1.11e-15!80;UBERON:0002193!2.38e-15!112;UBERON:0004765!8.81e-14!101;UBERON:0001434!8.81e-14!101;UBERON:0002405!7.83e-11!115;UBERON:0002204!5.94e-10!167;UBERON:0002384!2.71e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.70e-37,76;UBERON:0001474,1.34e-34,82;UBERON:0002390,5.34e-32,98;UBERON:0003061,5.34e-32,98;UBERON:0004765,2.49e-31,90;UBERON:0002405,3.02e-30,93;UBERON:0002193,8.10e-29,108;UBERON:0001434,5.73e-28,100;UBERON:0002204,9.82e-16,167;UBERON:0003081,4.25e-14,203;UBERON:0000926,4.75e-08,315;UBERON:0004120,4.75e-08,315;UBERON:0006603,4.75e-08,315;UBERON:0002384,2.52e-07,371 | |||
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|short_description=p@chr2:98279521..98279533,+ | |short_description=p@chr2:98279521..98279533,+ | ||
}} | }} |
Latest revision as of 13:27, 29 July 2015
Short description: | p@chr2:98279521..98279533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:98279521..98279533, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.70e-37 | 76 |
bone element | 1.34e-34 | 82 |
hematopoietic system | 5.34e-32 | 98 |
blood island | 5.34e-32 | 98 |
skeletal element | 2.49e-31 | 90 |
immune system | 3.02e-30 | 93 |
hemolymphoid system | 8.10e-29 | 108 |
skeletal system | 5.73e-28 | 100 |
musculoskeletal system | 9.82e-16 | 167 |
lateral plate mesoderm | 4.25e-14 | 203 |
mesoderm | 4.75e-08 | 315 |
mesoderm-derived structure | 4.75e-08 | 315 |
presumptive mesoderm | 4.75e-08 | 315 |
connective tissue | 2.52e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.46e-10 | 1 |
cutaneous T cell lymphoma | 1.46e-10 | 1 |
mycosis fungoides | 1.46e-10 | 1 |