FFCP PHASE1:Hg19::chr3:120365866..120365885,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:120365866..120365885,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr3:120365866..120365885,- | |||
|id=chr3:120365866..120365885,- | |||
|ontology_enrichment_celltype=CL:0002494!2.11e-20!16;CL:0002334!1.43e-18!12;CL:0000359!2.91e-11!32;CL:0000055!9.51e-10!180;CL:0000680!1.74e-09!57;CL:0000056!1.74e-09!57;CL:0000355!1.74e-09!57;CL:0000187!3.61e-09!54;CL:0000048!5.93e-09!430;CL:0000393!1.06e-08!60;CL:0000211!1.06e-08!60;CL:0000723!1.39e-08!436;CL:0000034!4.16e-08!444;CL:0000183!5.53e-08!59;CL:0000192!1.12e-07!42;CL:0000514!1.12e-07!42;CL:0002592!1.34e-07!3;CL:0000746!1.46e-07!3;CL:0000513!1.46e-07!3;CL:0002539!2.65e-07!10;CL:0002579!3.20e-07!3;CL:0000057!3.24e-07!75;CL:0002582!9.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002592;2.09e-20;3!CL:0002494;1.71e-19;16!CL:0000840;3.89e-11;5!CL:0000746;6.00e-10;3!CL:0000737;1.14e-07;4!CL:0000990;1.43e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,3.12e-20,3;CL:0002494,1.74e-19,16;CL:0000840,3.90e-11,5;CL:0001029,3.90e-11,5;CL:0000746,5.24e-10,3;CL:0000513,5.24e-10,3;CL:0000737,1.03e-07,4;CL:0000990,1.43e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000513;6.00e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;8.40e-08;1!DOID:3369;8.40e-08;1!DOID:3571;8.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.19e-08,1;DOID:3369,6.63e-08,1;DOID:3571,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004535!2.82e-21!110;UBERON:0001009!2.16e-20!113;UBERON:0004872!1.16e-16!84;UBERON:0001637!1.18e-14!42;UBERON:0003509!1.18e-14!42;UBERON:0004572!1.18e-14!42;UBERON:0000948!1.67e-14!24;UBERON:0005498!1.67e-14!24;UBERON:0004140!1.67e-14!24;UBERON:0009881!1.67e-14!24;UBERON:0004141!1.67e-14!24;UBERON:0003084!1.67e-14!24;UBERON:0007005!1.67e-14!24;UBERON:0004139!1.67e-14!24;UBERON:0004291!1.67e-14!24;UBERON:0000178!3.16e-13!15;UBERON:0000179!3.16e-13!15;UBERON:0000463!3.16e-13!15;UBERON:0007100!1.80e-12!27;UBERON:0004573!2.31e-12!33;UBERON:0004571!2.31e-12!33;UBERON:0003081!5.59e-11!216;UBERON:0003914!6.32e-11!118;UBERON:0001981!8.47e-10!60;UBERON:0007500!8.47e-10!60;UBERON:0004537!8.47e-10!60;UBERON:0006965!8.47e-10!60;UBERON:0002385!5.26e-09!63;UBERON:0001015!5.26e-09!63;UBERON:0000383!5.26e-09!63;UBERON:0001134!1.58e-08!61;UBERON:0002036!1.58e-08!61;UBERON:0003082!1.58e-08!61;UBERON:0000947!4.75e-08!21;UBERON:0010191!4.75e-08!21;UBERON:0000055!7.96e-08!69;UBERON:0001621!1.34e-07!3;UBERON:0003498!1.93e-07!5;UBERON:0005985!1.93e-07!5;UBERON:0004237!2.65e-07!10;UBERON:0004695!2.65e-07!10;UBERON:0002111!2.65e-07!10;UBERON:0004178!2.65e-07!10;UBERON:0000025!6.06e-07!194;UBERON:0004290!8.40e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-21;15!UBERON:0000179;1.22e-21;15!UBERON:0000463;1.22e-21;15!UBERON:0003498;2.09e-20;3!UBERON:0005985;2.09e-20;3!UBERON:0001621;2.09e-20;3!UBERON:0000948;5.82e-14;22!UBERON:0007100;3.45e-12;25!UBERON:0002390;2.46e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.22e-21,15;UBERON:0000179,1.22e-21,15;UBERON:0000463,1.22e-21,15;UBERON:0001621,3.12e-20,3;UBERON:0000948,1.00e-12,24;UBERON:0005498,1.00e-12,24;UBERON:0004140,1.00e-12,24;UBERON:0009881,1.00e-12,24;UBERON:0004141,1.00e-12,24;UBERON:0003084,1.00e-12,24;UBERON:0007005,1.00e-12,24;UBERON:0004139,1.00e-12,24;UBERON:0004291,1.00e-12,24;UBERON:0004535,1.37e-12,109;UBERON:0003498,2.25e-12,5;UBERON:0005985,2.25e-12,5;UBERON:0001009,3.61e-12,112;UBERON:0007100,3.20e-11,27;UBERON:0003081,2.46e-09,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,2.92124036154949,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.55725123687061,0,0,0,0,0,0,0,0,0,0,0,8.76277962867645,8.88061660226263,4.65352861816028,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,1.32409180813219,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.404132016209064,1.63461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,24.6331618947972,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.896974044789907,0.511707249066704,1.44768529029247,0,0.154209693802656,1.06537035187876,0.0821271560138091,1.03850885836724,0.813472649219715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,1.01091240786658,3.17020642346017,1.26377536871694,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0.608731130888112,0,0.281695602532241,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05958087385735,2.29391162142713,2.27858874869665,0.714695326373367,0,5.83625980073446,3.24018862342869,3.17250070517708,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,16.227340708559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05956061557231,0.907385542579434,0,0.295710299979268,0,0,0,0,2.12673371646396,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:120365866..120365885,- | |||
}} |
Latest revision as of 14:54, 29 July 2015
Short description: | p@chr3:120365866..120365885, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:120365866..120365885, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 3.12e-20 | 3 |
cardiocyte | 1.74e-19 | 16 |
immature conventional dendritic cell | 3.90e-11 | 5 |
common dendritic progenitor | 3.90e-11 | 5 |
cardiac muscle cell | 5.24e-10 | 3 |
cardiac muscle myoblast | 5.24e-10 | 3 |
striated muscle cell | 1.03e-07 | 4 |
conventional dendritic cell | 1.43e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.22e-21 | 15 |
haemolymphatic fluid | 1.22e-21 | 15 |
organism substance | 1.22e-21 | 15 |
coronary artery | 3.12e-20 | 3 |
heart | 1.00e-12 | 24 |
primitive heart tube | 1.00e-12 | 24 |
primary heart field | 1.00e-12 | 24 |
anterior lateral plate mesoderm | 1.00e-12 | 24 |
heart tube | 1.00e-12 | 24 |
heart primordium | 1.00e-12 | 24 |
cardiac mesoderm | 1.00e-12 | 24 |
cardiogenic plate | 1.00e-12 | 24 |
heart rudiment | 1.00e-12 | 24 |
cardiovascular system | 1.37e-12 | 109 |
heart blood vessel | 2.25e-12 | 5 |
coronary vessel | 2.25e-12 | 5 |
circulatory system | 3.61e-12 | 112 |
primary circulatory organ | 3.20e-11 | 27 |
lateral plate mesoderm | 2.46e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.19e-08 | 1 |
peripheral primitive neuroectodermal tumor | 6.63e-08 | 1 |
liver cancer | 9.29e-08 | 1 |