FFCP PHASE1:Hg19::chr3:131523446..131523459,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:131523446..131523459,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr3:131523446..131523459,- | |||
|id=chr3:131523446..131523459,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.06e-56;4!UBERON:0007284;8.06e-56;4!UBERON:0010226;2.45e-26;1!UBERON:0004140;3.58e-26;1!UBERON:0010227;5.23e-26;1!UBERON:0006603;2.23e-08;65!UBERON:0003104;1.04e-07;31 | |||
|ontology_enrichment_disease=DOID:114!2.09e-27!2;DOID:178!1.41e-14!1;DOID:326!1.41e-14!1;DOID:3978!1.41e-14!1;DOID:3394!1.41e-14!1;DOID:5844!1.41e-14!1;DOID:1287!3.16e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.46e-13;2!DOID:1287;1.98e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.55e-13,2;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!7.60e-41!3;UBERON:0009751!7.60e-41!3;UBERON:0004151!7.60e-41!3;UBERON:0000946!7.60e-41!3;UBERON:0002523!7.60e-41!3;UBERON:0005983!7.60e-41!3;UBERON:0002165!7.60e-41!3;UBERON:0002062!7.60e-41!3;UBERON:0007280!7.60e-41!3;UBERON:0007100!3.25e-39!27;UBERON:0002081!1.07e-27!2;UBERON:0002133!1.22e-27!2;UBERON:0000948!6.00e-20!24;UBERON:0005498!6.00e-20!24;UBERON:0004140!6.00e-20!24;UBERON:0009881!6.00e-20!24;UBERON:0004141!6.00e-20!24;UBERON:0003084!6.00e-20!24;UBERON:0007005!6.00e-20!24;UBERON:0004139!6.00e-20!24;UBERON:0004291!6.00e-20!24;UBERON:0002146!4.73e-15!1;UBERON:0005623!4.73e-15!1;UBERON:0002084!5.42e-15!1;UBERON:0002082!5.42e-15!1;UBERON:0004706!5.42e-15!1;UBERON:0003103!7.99e-15!69;UBERON:0002079!8.17e-15!1;UBERON:0002135!9.36e-15!1;UBERON:0002134!1.07e-14!1;UBERON:0005208!1.07e-14!1;UBERON:0005946!1.07e-14!1;UBERON:0005965!1.07e-14!1;UBERON:0002078!1.07e-14!1;UBERON:0002342!2.91e-09!14;UBERON:0005062!2.91e-09!14;UBERON:0001009!1.14e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.12e-74;3!UBERON:0003978;4.55e-74;3!UBERON:0000946;4.55e-74;3!UBERON:0007100;7.62e-63;25!UBERON:0002081;8.50e-50;2!UBERON:0002133;1.24e-49;2!UBERON:0000948;1.74e-40;22!UBERON:0002084;2.45e-26;1!UBERON:0002146;2.45e-26;1!UBERON:0002082;2.45e-26;1!UBERON:0005623;2.45e-26;1!UBERON:0002079;5.23e-26;1!UBERON:0002135;7.62e-26;1!UBERON:0002134;1.11e-25;1!UBERON:0005208;1.11e-25;1!UBERON:0004145;1.11e-25;1!UBERON:0005946;1.11e-25;1!UBERON:0005965;1.11e-25;1!UBERON:0002078;1.11e-25;1!UBERON:0010313;6.92e-23;10!UBERON:0003103;1.07e-13;61!UBERON:0001009;1.22e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.54e-74,3;UBERON:0009751,3.54e-74,3;UBERON:0004151,3.54e-74,3;UBERON:0000946,3.54e-74,3;UBERON:0002523,3.54e-74,3;UBERON:0005983,3.54e-74,3;UBERON:0002165,3.54e-74,3;UBERON:0002062,3.54e-74,3;UBERON:0007280,3.54e-74,3;UBERON:0007100,3.24e-58,27;UBERON:0002081,8.50e-50,2;UBERON:0010227,8.50e-50,2;UBERON:0002133,1.09e-49,2;UBERON:0000948,3.83e-37,24;UBERON:0005498,3.83e-37,24;UBERON:0004140,3.83e-37,24;UBERON:0009881,3.83e-37,24;UBERON:0004141,3.83e-37,24;UBERON:0003084,3.83e-37,24;UBERON:0007005,3.83e-37,24;UBERON:0004139,3.83e-37,24;UBERON:0004291,3.83e-37,24;UBERON:0004797,2.31e-32,7;UBERON:0002146,2.16e-26,1;UBERON:0005623,2.16e-26,1;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002079,5.93e-26,1;UBERON:0002135,7.62e-26,1;UBERON:0002134,9.79e-26,1;UBERON:0005208,9.79e-26,1;UBERON:0005946,9.79e-26,1;UBERON:0005965,9.79e-26,1;UBERON:0002078,9.79e-26,1;UBERON:0003103,2.94e-23,68;UBERON:0010313,6.42e-23,10;UBERON:0002342,6.42e-23,10;UBERON:0005062,6.42e-23,10;UBERON:0001009,3.77e-14,112;UBERON:0004872,7.01e-11,83;UBERON:0007023,1.17e-10,114;UBERON:0004145,1.67e-09,3;UBERON:0004535,2.70e-08,109;UBERON:0003914,9.96e-08,117;UBERON:0010314,8.53e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,11.9163420486076,1.43574604915363,0.399358000997982,1.28767814440971,5.13294352116307,6.9198976661328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,11.2555634962123,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:131523446..131523459,- | |||
}} |
Latest revision as of 15:52, 29 July 2015
Short description: | p@chr3:131523446..131523459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:131523446..131523459, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.55e-13 | 2 |
cardiovascular system disease | 2.04e-07 | 4 |