FFCP PHASE1:Hg19::chr3:14852011..14852032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:14852011..14852032,+ | |||
|description=CAGE_peak_at_chr3:14852011..14852032,+ | |description=CAGE_peak_at_chr3:14852011..14852032,+ | ||
|id=chr3:14852011..14852032,+ | |id=chr3:14852011..14852032,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.24e-26!24;CL:0000115!3.38e-25!35;CL:0002078!2.15e-20!44;CL:0000071!5.47e-20!18;CL:0002546!5.47e-20!18;CL:0000213!6.16e-13!57;CL:0000215!6.16e-13!57;CL:1000413!9.37e-11!9;CL:0000990!4.07e-08!8;CL:0002543!6.20e-08!6;CL:0002544!6.42e-08!6;CL:0005020!1.18e-07!6;CL:0002138!1.18e-07!6;CL:0005022!1.18e-07!6 | |ontology_enrichment_celltype=CL:0002139!4.24e-26!24;CL:0000115!3.38e-25!35;CL:0002078!2.15e-20!44;CL:0000071!5.47e-20!18;CL:0002546!5.47e-20!18;CL:0000213!6.16e-13!57;CL:0000215!6.16e-13!57;CL:1000413!9.37e-11!9;CL:0000990!4.07e-08!8;CL:0002543!6.20e-08!6;CL:0002544!6.42e-08!6;CL:0005020!1.18e-07!6;CL:0002138!1.18e-07!6;CL:0005022!1.18e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.60e-46;24!CL:0000115;8.34e-39;36!CL:0000071;4.75e-35;18!CL:0002078;3.38e-26;45!CL:1000413;3.18e-18;9!CL:0000213;1.38e-17;58!CL:0000215;1.38e-17;58!CL:0002544;4.09e-13;6!CL:0002543;5.62e-13;6!CL:0002138;1.39e-12;6!CL:0000990;2.45e-11;8!CL:0000840;9.67e-10;5!CL:0000451;5.04e-09;10!CL:0002618;1.26e-07;3!CL:0000453;3.66e-07;5!CL:0002144;4.21e-07;3!CL:0002188;5.18e-07;5 | |ontology_enrichment_celltype_v019=CL:0002139;3.60e-46;24!CL:0000115;8.34e-39;36!CL:0000071;4.75e-35;18!CL:0002078;3.38e-26;45!CL:1000413;3.18e-18;9!CL:0000213;1.38e-17;58!CL:0000215;1.38e-17;58!CL:0002544;4.09e-13;6!CL:0002543;5.62e-13;6!CL:0002138;1.39e-12;6!CL:0000990;2.45e-11;8!CL:0000840;9.67e-10;5!CL:0000451;5.04e-09;10!CL:0002618;1.26e-07;3!CL:0000453;3.66e-07;5!CL:0002144;4.21e-07;3!CL:0002188;5.18e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.85e-46,36;CL:0002139,2.64e-46,24;CL:0002078,5.03e-40,45;CL:0000071,4.01e-35,18;CL:0002546,4.01e-35,18;CL:0000213,1.01e-28,58;CL:0000215,1.01e-28,58;CL:1000413,2.85e-18,9;CL:0002543,3.78e-13,6;CL:0002544,4.02e-13,6;CL:0005020,1.21e-12,6;CL:0002138,1.21e-12,6;CL:0005022,1.21e-12,6;CL:0000990,2.09e-11,8;CL:0000840,8.96e-10,5;CL:0001029,8.96e-10,5;CL:0000451,4.44e-09,10;CL:0000222,6.30e-09,121;CL:0002618,1.12e-07,3;CL:0000453,3.25e-07,5;CL:0002188,3.52e-07,5;CL:0002144,5.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.75e-35;18!CL:0005022;1.39e-12;6!UBERON:0004872;8.42e-07;7 | |ontology_enrichment_development_v019=CL:0002546;4.75e-35;18!CL:0005022;1.39e-12;6!UBERON:0004872;8.42e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr3:14852011..14852032,+ | |short_description=p@chr3:14852011..14852032,+ | ||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p@chr3:14852011..14852032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14852011..14852032, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.85e-46 | 36 |
endothelial cell of vascular tree | 2.64e-46 | 24 |
meso-epithelial cell | 5.03e-40 | 45 |
blood vessel endothelial cell | 4.01e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.01e-35 | 18 |
lining cell | 1.01e-28 | 58 |
barrier cell | 1.01e-28 | 58 |
endothelial cell of artery | 2.85e-18 | 9 |
vein endothelial cell | 3.78e-13 | 6 |
aortic endothelial cell | 4.02e-13 | 6 |
lymphangioblast | 1.21e-12 | 6 |
endothelial cell of lymphatic vessel | 1.21e-12 | 6 |
vascular lymphangioblast | 1.21e-12 | 6 |
conventional dendritic cell | 2.09e-11 | 8 |
immature conventional dendritic cell | 8.96e-10 | 5 |
common dendritic progenitor | 8.96e-10 | 5 |
dendritic cell | 4.44e-09 | 10 |
mesodermal cell | 6.30e-09 | 121 |
endothelial cell of umbilical vein | 1.12e-07 | 3 |
Langerhans cell | 3.25e-07 | 5 |
glomerular endothelial cell | 3.52e-07 | 5 |
capillary endothelial cell | 5.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.01e-35 | 18 |
endothelium | 4.01e-35 | 18 |
cardiovascular system endothelium | 4.01e-35 | 18 |
squamous epithelium | 5.00e-29 | 25 |
simple squamous epithelium | 1.09e-27 | 22 |
vessel | 1.18e-19 | 68 |
endothelial tube | 2.85e-18 | 9 |
arterial system endothelium | 2.85e-18 | 9 |
endothelium of artery | 2.85e-18 | 9 |
vasculature | 5.60e-16 | 78 |
vascular system | 5.60e-16 | 78 |
epithelial tube open at both ends | 4.75e-14 | 59 |
blood vessel | 4.75e-14 | 59 |
blood vasculature | 4.75e-14 | 59 |
vascular cord | 4.75e-14 | 59 |
splanchnic layer of lateral plate mesoderm | 4.99e-14 | 83 |
adult organism | 8.22e-13 | 114 |
circulatory system | 8.36e-12 | 112 |
anatomical conduit | 1.51e-11 | 240 |
cardiovascular system | 1.54e-11 | 109 |
vein | 4.32e-11 | 9 |
venous blood vessel | 4.32e-11 | 9 |
venous system | 4.32e-11 | 9 |
epithelial tube | 8.97e-11 | 117 |
tube | 2.71e-09 | 192 |
lymphatic vessel | 3.05e-09 | 8 |
lymph vasculature | 3.05e-09 | 8 |
lymphatic part of lymphoid system | 3.05e-09 | 8 |
lateral plate mesoderm | 1.06e-07 | 203 |
lymphoid system | 3.32e-07 | 10 |
microcirculatory vessel | 5.86e-07 | 3 |
endothelium of capillary | 5.86e-07 | 3 |
capillary | 5.86e-07 | 3 |