FFCP PHASE1:Hg19::chr3:14852011..14852032,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:14852011..14852032,+ to FFCP PHASE1:Hg19::chr3:14852011..14852032,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:14852011..14852032,+ | |||
|description=CAGE_peak_at_chr3:14852011..14852032,+ | |||
|id=chr3:14852011..14852032,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.24e-26!24;CL:0000115!3.38e-25!35;CL:0002078!2.15e-20!44;CL:0000071!5.47e-20!18;CL:0002546!5.47e-20!18;CL:0000213!6.16e-13!57;CL:0000215!6.16e-13!57;CL:1000413!9.37e-11!9;CL:0000990!4.07e-08!8;CL:0002543!6.20e-08!6;CL:0002544!6.42e-08!6;CL:0005020!1.18e-07!6;CL:0002138!1.18e-07!6;CL:0005022!1.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.60e-46;24!CL:0000115;8.34e-39;36!CL:0000071;4.75e-35;18!CL:0002078;3.38e-26;45!CL:1000413;3.18e-18;9!CL:0000213;1.38e-17;58!CL:0000215;1.38e-17;58!CL:0002544;4.09e-13;6!CL:0002543;5.62e-13;6!CL:0002138;1.39e-12;6!CL:0000990;2.45e-11;8!CL:0000840;9.67e-10;5!CL:0000451;5.04e-09;10!CL:0002618;1.26e-07;3!CL:0000453;3.66e-07;5!CL:0002144;4.21e-07;3!CL:0002188;5.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.85e-46,36;CL:0002139,2.64e-46,24;CL:0002078,5.03e-40,45;CL:0000071,4.01e-35,18;CL:0002546,4.01e-35,18;CL:0000213,1.01e-28,58;CL:0000215,1.01e-28,58;CL:1000413,2.85e-18,9;CL:0002543,3.78e-13,6;CL:0002544,4.02e-13,6;CL:0005020,1.21e-12,6;CL:0002138,1.21e-12,6;CL:0005022,1.21e-12,6;CL:0000990,2.09e-11,8;CL:0000840,8.96e-10,5;CL:0001029,8.96e-10,5;CL:0000451,4.44e-09,10;CL:0000222,6.30e-09,121;CL:0002618,1.12e-07,3;CL:0000453,3.25e-07,5;CL:0002188,3.52e-07,5;CL:0002144,5.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.75e-35;18!CL:0005022;1.39e-12;6!UBERON:0004872;8.42e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-39!115;UBERON:0001986!5.47e-20!18;UBERON:0004638!5.47e-20!18;UBERON:0004852!5.47e-20!18;UBERON:0004111!1.56e-17!241;UBERON:0006914!7.04e-17!25;UBERON:0000487!2.17e-16!22;UBERON:0000025!7.40e-16!194;UBERON:0000477!3.00e-15!286;UBERON:0001049!1.13e-12!57;UBERON:0005068!1.13e-12!57;UBERON:0006241!1.13e-12!57;UBERON:0007135!1.13e-12!57;UBERON:0001893!8.37e-12!34;UBERON:0002020!1.01e-11!34;UBERON:0003528!1.01e-11!34;UBERON:0002791!2.71e-11!33;UBERON:0003080!3.37e-11!42;UBERON:0001869!6.62e-11!32;UBERON:0003915!9.37e-11!9;UBERON:0004700!9.37e-11!9;UBERON:0001917!9.37e-11!9;UBERON:0002780!1.61e-10!41;UBERON:0001890!1.61e-10!41;UBERON:0006240!1.61e-10!41;UBERON:0002616!3.18e-10!59;UBERON:0001017!6.51e-10!82;UBERON:0003075!8.84e-10!86;UBERON:0007284!8.84e-10!86;UBERON:0005743!1.38e-09!86;UBERON:0000055!2.73e-09!69;UBERON:0002346!8.33e-09!90;UBERON:0002619!2.46e-08!22;UBERON:0004872!2.93e-08!84;UBERON:0000955!4.01e-08!69;UBERON:0006238!4.01e-08!69;UBERON:0000468!4.06e-08!659;UBERON:0000956!1.22e-07!25;UBERON:0000203!1.22e-07!25;UBERON:0000073!1.40e-07!94;UBERON:0001016!1.40e-07!94;UBERON:0000467!1.72e-07!625;UBERON:0000480!2.08e-07!626;UBERON:0001950!2.16e-07!20;UBERON:0002049!7.76e-07!79;UBERON:0007798!7.76e-07!79;UBERON:0001981!9.46e-07!60;UBERON:0007500!9.46e-07!60;UBERON:0004537!9.46e-07!60;UBERON:0006965!9.46e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.75e-35;18!UBERON:0001986;4.75e-35;18!UBERON:0004852;4.75e-35;18!UBERON:0006914;5.35e-29;25!UBERON:0000487;1.25e-27;22!UBERON:0003915;3.18e-18;9!UBERON:0004700;3.18e-18;9!UBERON:0001917;3.18e-18;9!UBERON:0000490;2.55e-15;33!UBERON:0001638;7.39e-11;9!UBERON:0003920;7.39e-11;9!UBERON:0004582;7.39e-11;9!UBERON:0000055;2.76e-10;65!UBERON:0001473;3.37e-09;8!UBERON:0004536;3.37e-09;8!UBERON:0006558;3.37e-09;8!UBERON:0007500;1.79e-07;56!UBERON:0001981;1.79e-07;56!UBERON:0004537;1.79e-07;56!UBERON:0002465;3.59e-07;10!UBERON:0010523;4.21e-07;3!UBERON:0001915;4.21e-07;3!UBERON:0001982;4.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.01e-35,18;UBERON:0001986,4.01e-35,18;UBERON:0004852,4.01e-35,18;UBERON:0006914,5.00e-29,25;UBERON:0000487,1.09e-27,22;UBERON:0000055,1.18e-19,68;UBERON:0003915,2.85e-18,9;UBERON:0004700,2.85e-18,9;UBERON:0001917,2.85e-18,9;UBERON:0002049,5.60e-16,78;UBERON:0007798,5.60e-16,78;UBERON:0007500,4.75e-14,59;UBERON:0001981,4.75e-14,59;UBERON:0004537,4.75e-14,59;UBERON:0006965,4.75e-14,59;UBERON:0004872,4.99e-14,83;UBERON:0007023,8.22e-13,114;UBERON:0001009,8.36e-12,112;UBERON:0004111,1.51e-11,240;UBERON:0004535,1.54e-11,109;UBERON:0001638,4.32e-11,9;UBERON:0003920,4.32e-11,9;UBERON:0004582,4.32e-11,9;UBERON:0003914,8.97e-11,117;UBERON:0000025,2.71e-09,192;UBERON:0001473,3.05e-09,8;UBERON:0004536,3.05e-09,8;UBERON:0006558,3.05e-09,8;UBERON:0003081,1.06e-07,203;UBERON:0002465,3.32e-07,10;UBERON:0010523,5.86e-07,3;UBERON:0001915,5.86e-07,3;UBERON:0001982,5.86e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0.257575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0.50133791063589,0.434539556882471,0,1.45990461090791,0,0,0,1.83370705696798,0,0,4.86821090482025,5.57215159357655,6.24902414438666,0,0,0,5.36658499890104,3.4409383804245,4.16568601929113,7.34900324501212,3.35599548967925,1.37559020970034,4.80688423034664,4.90991842421725,6.04802646567407,7.02913286805807,3.22263453687318,3.04108842287405,3.1728067481262,2.57364156242108,4.86085168729056,4.91148505562439,7.85852804191594,4.72968218029953,1.53316637465883,6.6448596169769,4.76324534219059,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.929551542956147,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,2.80483547606892,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,3.3204282985047,1.38895653772983,2.47330397904978,0,0,0.738651018262192,3.04205544681009,4.16167254408439,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,5.68666920354483,3.91215522135986,1.94324324491925,4.62681758070868,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,1.64647446479951,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,2.4906390476222,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.996239941255349,2.21027132424918,0,0.102268682502155,0,0,0,0,0,1.1837208676432,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,1.41832609060762,0,0,0,0.885741385813839,0.241192877250816,0,0.442317039724898,0.295547618953547,0.438770794307945,0,0,2.38545801361771,0,0,0,0.108647371922008,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,0.611030144933625,0,0,0,0.404406797884062,2.40773294189637,0,0,0,0.242780379534093,0.789168805698781,0,0,2.46427660551103,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.50648636764703,0,0,2.13452994739353,0.19980960958213,0.288180834308212,0.229073192331831,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,1.27746588066972,0,0,2.51354161145029,1.14580212005842,4.30723814746088,0.199679000498991,0,1.11585728720936,1.88113722962834,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.482259445395058,0.137539436597234,0.415440338029185,10.1238251198175,6.96421759102155,0.91124334987037,0,1.02447419488958,2.30800187793992,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.387848869084652,0.39669780522807,0,0,2.45611048905698,2.67247318669432,3.72815149812476,0.496166021811951,0,0,0,2.1760712134779,3.7603484103405,0.612691153526923,0.327872630709804,0,0.886068179966986,0.488105059607853,0.3755727921195,0,0.332787154610557,1.05563885000352,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0.584580926518165,1.32864840313363,3.92556946214026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,1.11743701340006,0.615349092722265,0.252071696221718,1.31398779682014,0.484426936895553,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0,0,0.607838261565552,0,0.826747186004736,0.824405532520789,0,0.548257766857182,3.96968942711435,0,0,3.74991285114801,0,0.606965604236632,0,1.06442844195167,0,0,0.815636795721981,1.05236437700559,0,0,1.33438257845874,0.157115589916002,0,0,0.215927591218621,0,1.07214816264985,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.718639647993729,0,1.45713297917742,0,0.198950775161368,0.356760272332706,0,0,0.150962843566674,1.23478652972711,0.437119121007915,0,0.980593287015622,0,0.196308467114945,0,1.6906229103336,0,4.79317981697253,4.57651004612398,0,0,0,0,2.19100916473955,1.37618785021362,0.430018749454354,0,0.815897882290976,0.872701380680755,1.5870805215462,0,0,0,0,0.327796715891087,0,0.101988829741982,0.26721740526556,0,0.50141507858475,1.13668047327359,1.6077847809370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| ||
|short_description=p@chr3:14852011..14852032,+ | |||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p@chr3:14852011..14852032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:14852011..14852032, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.85e-46 | 36 |
endothelial cell of vascular tree | 2.64e-46 | 24 |
meso-epithelial cell | 5.03e-40 | 45 |
blood vessel endothelial cell | 4.01e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.01e-35 | 18 |
lining cell | 1.01e-28 | 58 |
barrier cell | 1.01e-28 | 58 |
endothelial cell of artery | 2.85e-18 | 9 |
vein endothelial cell | 3.78e-13 | 6 |
aortic endothelial cell | 4.02e-13 | 6 |
lymphangioblast | 1.21e-12 | 6 |
endothelial cell of lymphatic vessel | 1.21e-12 | 6 |
vascular lymphangioblast | 1.21e-12 | 6 |
conventional dendritic cell | 2.09e-11 | 8 |
immature conventional dendritic cell | 8.96e-10 | 5 |
common dendritic progenitor | 8.96e-10 | 5 |
dendritic cell | 4.44e-09 | 10 |
mesodermal cell | 6.30e-09 | 121 |
endothelial cell of umbilical vein | 1.12e-07 | 3 |
Langerhans cell | 3.25e-07 | 5 |
glomerular endothelial cell | 3.52e-07 | 5 |
capillary endothelial cell | 5.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.01e-35 | 18 |
endothelium | 4.01e-35 | 18 |
cardiovascular system endothelium | 4.01e-35 | 18 |
squamous epithelium | 5.00e-29 | 25 |
simple squamous epithelium | 1.09e-27 | 22 |
vessel | 1.18e-19 | 68 |
endothelial tube | 2.85e-18 | 9 |
arterial system endothelium | 2.85e-18 | 9 |
endothelium of artery | 2.85e-18 | 9 |
vasculature | 5.60e-16 | 78 |
vascular system | 5.60e-16 | 78 |
epithelial tube open at both ends | 4.75e-14 | 59 |
blood vessel | 4.75e-14 | 59 |
blood vasculature | 4.75e-14 | 59 |
vascular cord | 4.75e-14 | 59 |
splanchnic layer of lateral plate mesoderm | 4.99e-14 | 83 |
adult organism | 8.22e-13 | 114 |
circulatory system | 8.36e-12 | 112 |
anatomical conduit | 1.51e-11 | 240 |
cardiovascular system | 1.54e-11 | 109 |
vein | 4.32e-11 | 9 |
venous blood vessel | 4.32e-11 | 9 |
venous system | 4.32e-11 | 9 |
epithelial tube | 8.97e-11 | 117 |
tube | 2.71e-09 | 192 |
lymphatic vessel | 3.05e-09 | 8 |
lymph vasculature | 3.05e-09 | 8 |
lymphatic part of lymphoid system | 3.05e-09 | 8 |
lateral plate mesoderm | 1.06e-07 | 203 |
lymphoid system | 3.32e-07 | 10 |
microcirculatory vessel | 5.86e-07 | 3 |
endothelium of capillary | 5.86e-07 | 3 |
capillary | 5.86e-07 | 3 |