FFCP PHASE1:Hg19::chr3:165178224..165178261,+: Difference between revisions
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|id=chr3:165178224..165178261,+
|short_description=p@chr3:165178224..165178261,+
|description=CAGE_peak_at_chr3:165178224..165178261,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:165178224..165178261,+ | |||
|coexpression_cluster_id=C4301 | |||
|description=CAGE_peak_at_chr3:165178224..165178261,+ | |||
|id=chr3:165178224..165178261,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.68e-29!254;CL:0002076!1.34e-17!43;CL:0000223!1.12e-13!59;CL:1000497!3.88e-09!18;CL:0002518!3.88e-09!18;CL:1000507!1.48e-08!12;CL:1000494!1.48e-08!12;CL:0002368!4.16e-08!13;CL:0002159!1.07e-07!13;CL:1000449!4.34e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.64e-12;42!CL:1000507;3.55e-12;10!CL:1000494;3.55e-12;10!CL:1000497;2.20e-10;17!CL:0002518;2.20e-10;17!CL:0002159;3.35e-10;14!CL:0000349;1.33e-09;19!CL:0002368;1.49e-09;13!CL:0000244;7.62e-08;4!CL:0000731;7.62e-08;4!CL:1000449;1.33e-07;15!CL:0002541;1.37e-07;3!CL:0002231;4.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.08e-34,253;CL:0002076,9.36e-16,42;CL:0000223,2.85e-12,58;CL:1000507,3.76e-12,10;CL:1000494,3.76e-12,10;CL:1000497,2.29e-10,17;CL:0002518,2.29e-10,17;CL:0002159,4.18e-10,14;CL:0000349,1.28e-09,19;CL:0002368,1.47e-09,13;CL:0000244,7.62e-08,4;CL:0000731,7.62e-08,4;CL:1000449,1.38e-07,15;CL:0002541,1.42e-07,3;CL:0002231,4.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.79e-07;58 | |||
|ontology_enrichment_disease=DOID:305!3.50e-13!106;DOID:0050687!1.44e-09!143;DOID:1749!1.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.09e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.40e-12,106;DOID:1749,5.48e-09,14;DOID:0050687,6.42e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.00e-12!9;UBERON:0005631!1.80e-11!14;UBERON:0000158!1.80e-11!14;UBERON:0004119!7.16e-11!169;UBERON:0000925!7.16e-11!169;UBERON:0006595!7.16e-11!169;UBERON:0006554!1.14e-10!44;UBERON:0001008!2.77e-10!45;UBERON:0001004!7.96e-10!72;UBERON:0000065!1.02e-08!53;UBERON:0009773!1.48e-08!12;UBERON:0001231!1.48e-08!12;UBERON:0004810!1.48e-08!12;UBERON:0000058!7.87e-08!26;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0003124!2.90e-07!7;UBERON:0004211!4.34e-07!16;UBERON:0001285!4.34e-07!16;UBERON:0007684!4.34e-07!16;UBERON:0003220!4.34e-07!16;UBERON:0004208!4.34e-07!16;UBERON:0002113!5.68e-07!27;UBERON:0003918!5.68e-07!27;UBERON:0005095!5.68e-07!27;UBERON:0007687!5.68e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.72e-17;9!UBERON:0001557;9.72e-17;9!UBERON:0005631;1.22e-13;10!UBERON:0000158;1.22e-13;10!UBERON:0004211;3.55e-12;10!UBERON:0009773;3.55e-12;10!UBERON:0001231;3.55e-12;10!UBERON:0004810;3.55e-12;10!UBERON:0006554;1.73e-11;30!UBERON:0001008;1.73e-11;30!UBERON:0000065;2.16e-09;44!UBERON:0000305;4.10e-08;7!UBERON:0002113;4.12e-08;24!UBERON:0011143;4.12e-08;24!UBERON:0000072;4.16e-08;37!UBERON:0006555;1.33e-07;15!UBERON:0004819;1.33e-07;15!UBERON:0001285;1.33e-07;15!UBERON:0007684;1.33e-07;15!UBERON:0003124;1.37e-07;3!UBERON:0000920;1.37e-07;3!UBERON:0000478;3.93e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.00e-17,9;UBERON:0005631,6.59e-14,14;UBERON:0000158,6.59e-14,14;UBERON:0006554,2.32e-13,47;UBERON:0001008,5.78e-13,48;UBERON:0004810,3.76e-12,10;UBERON:0004119,1.66e-11,160;UBERON:0000925,1.66e-11,160;UBERON:0006595,1.66e-11,160;UBERON:0000065,1.04e-08,54;UBERON:0001557,1.74e-08,19;UBERON:0001004,1.84e-08,74;UBERON:0008947,1.85e-08,38;UBERON:0003258,1.85e-08,38;UBERON:0000305,4.20e-08,7;UBERON:0004211,1.38e-07,15;UBERON:0009773,1.38e-07,15;UBERON:0001231,1.38e-07,15;UBERON:0001285,1.38e-07,15;UBERON:0007684,1.38e-07,15;UBERON:0004208,1.38e-07,15;UBERON:0000920,1.42e-07,3;UBERON:0003124,1.99e-07,7;UBERON:0002113,2.64e-07,26;UBERON:0003918,2.64e-07,26;UBERON:0011143,2.64e-07,26;UBERON:0005095,2.64e-07,26;UBERON:0007687,2.64e-07,26;UBERON:0000478,3.81e-07,24;UBERON:0000072,4.54e-07,47;UBERON:0001007,5.02e-07,145;UBERON:0001555,5.02e-07,145;UBERON:0007026,5.02e-07,145;UBERON:0006555,5.08e-07,16;UBERON:0004819,5.08e-07,16;UBERON:0004871,5.10e-07,8 | |||
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| ||
|short_description=p@chr3:165178224..165178261,+ | |||
}} | }} |
Latest revision as of 17:55, 29 July 2015
Short description: | p@chr3:165178224..165178261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:165178224..165178261, + |
Coexpression cluster: | C4301_alveolar_malignant_amniotic_squamous_Renal_oral_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.08e-34 | 253 |
endo-epithelial cell | 9.36e-16 | 42 |
endodermal cell | 2.85e-12 | 58 |
kidney tubule cell | 3.76e-12 | 10 |
nephron tubule epithelial cell | 3.76e-12 | 10 |
kidney cell | 2.29e-10 | 17 |
kidney epithelial cell | 2.29e-10 | 17 |
general ecto-epithelial cell | 4.18e-10 | 14 |
extraembryonic cell | 1.28e-09 | 19 |
respiratory epithelial cell | 1.47e-09 | 13 |
transitional epithelial cell | 7.62e-08 | 4 |
urothelial cell | 7.62e-08 | 4 |
epithelial cell of nephron | 1.38e-07 | 15 |
chorionic membrane mesenchymal stem cell | 1.42e-07 | 3 |
epithelial cell of prostate | 4.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.40e-12 | 106 |
squamous cell carcinoma | 5.48e-09 | 14 |
cell type cancer | 6.42e-08 | 143 |