FFCP PHASE1:Hg19::chr4:46126009..46126045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2565 | |EntrezGene=entrezgene:2565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4086 | |HGNC=HGNC:4086 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F5H2S0,Q8N1C3 | |UniProt=uniprot:F5H2S0,uniprot:Q8N1C3 | ||
|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end | |association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end | ||
|cluster_id=chr4:46126009..46126045,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_GABRG1_5end | |description=CAGE_peak_1_at_GABRG1_5end | ||
Revision as of 05:24, 30 July 2015
| Short description: | p1@GABRG1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GABRG1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 36bp_to_ENST00000540030, NM_173536, uc003gxb.2_5end |
| EntrezGene: | 2565 |
| HGNC: | 4086 |
| UniProt: | F5H2S0Q8N1C3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GABRG1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.21e-135 | 56 |
| neural rod | 3.21e-135 | 56 |
| future spinal cord | 3.21e-135 | 56 |
| neural keel | 3.21e-135 | 56 |
| regional part of nervous system | 1.45e-125 | 53 |
| regional part of brain | 1.45e-125 | 53 |
| brain | 1.10e-107 | 68 |
| future brain | 1.10e-107 | 68 |
| central nervous system | 1.48e-105 | 81 |
| regional part of forebrain | 4.65e-104 | 41 |
Showing 1 to 10 of 99 entries
