FFCP PHASE1:Hg19::chr4:93587821..93587823,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:93587821..93587823,+ | |||
|coexpression_cluster_id=C1084 | |coexpression_cluster_id=C1084 | ||
|description=CAGE_peak_at_chr4:93587821..93587823,+ | |description=CAGE_peak_at_chr4:93587821..93587823,+ |
Latest revision as of 08:05, 30 July 2015
Short description: | p@chr4:93587821..93587823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:93587821..93587823, + |
Coexpression cluster: | C1084_cerebellum_iPS_HES3GFP_nonsmall_occipital_parietal_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr4:93587821..93587823+ |
---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.98e-15 | 6 |
neuroblast | 3.98e-15 | 6 |
electrically signaling cell | 3.98e-15 | 6 |
neuronal stem cell | 1.74e-11 | 8 |
lung fibroblast | 2.79e-11 | 1 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
nervous system | 3.85e-27 | 89 |
central nervous system | 1.02e-26 | 81 |
neural tube | 6.62e-26 | 56 |
neural rod | 6.62e-26 | 56 |
future spinal cord | 6.62e-26 | 56 |
neural keel | 6.62e-26 | 56 |
neural nucleus | 6.75e-26 | 9 |
nucleus of brain | 6.75e-26 | 9 |
regional part of nervous system | 2.85e-23 | 53 |
regional part of brain | 2.85e-23 | 53 |
Showing 1 to 10 of 78 entries