FFCP PHASE1:Hg19::chr5:106725704..106725717,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:106725704..106725717,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr5:106725704..106725717,+ | |description=CAGE_peak_at_chr5:106725704..106725717,+ | ||
|id=chr5:106725704..106725717,+ | |id=chr5:106725704..106725717,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.04e-107!42;CL:0000860!1.87e-99!45;CL:0000766!1.15e-74!76;CL:0002009!1.30e-73!65;CL:0002194!7.57e-72!63;CL:0000576!7.57e-72!63;CL:0000040!7.57e-72!63;CL:0000559!7.57e-72!63;CL:0000557!8.51e-67!71;CL:0000839!5.70e-64!70;CL:0000738!1.02e-53!140;CL:0000763!7.23e-51!112;CL:0000049!7.23e-51!112;CL:0002087!1.88e-49!119;CL:0000037!4.36e-42!172;CL:0000566!4.36e-42!172;CL:0002031!7.21e-42!124;CL:0000988!2.77e-39!182;CL:0002032!1.19e-37!165;CL:0000837!1.19e-37!165;CL:0002393!2.29e-37!9;CL:0002397!2.29e-37!9;CL:0000134!1.85e-16!358;CL:0002320!5.80e-16!365;CL:0000767!2.62e-14!3;CL:0000219!3.28e-14!390;CL:0000875!1.80e-13!3;CL:0002396!1.80e-13!3;CL:0000842!3.24e-13!3;CL:0000034!2.47e-12!444;CL:0000048!4.13e-12!430;CL:0000723!8.21e-12!436;CL:0000224!5.01e-10!4;CL:0000094!3.11e-09!8;CL:0000080!8.09e-07!6 | |ontology_enrichment_celltype=CL:0002057!4.04e-107!42;CL:0000860!1.87e-99!45;CL:0000766!1.15e-74!76;CL:0002009!1.30e-73!65;CL:0002194!7.57e-72!63;CL:0000576!7.57e-72!63;CL:0000040!7.57e-72!63;CL:0000559!7.57e-72!63;CL:0000557!8.51e-67!71;CL:0000839!5.70e-64!70;CL:0000738!1.02e-53!140;CL:0000763!7.23e-51!112;CL:0000049!7.23e-51!112;CL:0002087!1.88e-49!119;CL:0000037!4.36e-42!172;CL:0000566!4.36e-42!172;CL:0002031!7.21e-42!124;CL:0000988!2.77e-39!182;CL:0002032!1.19e-37!165;CL:0000837!1.19e-37!165;CL:0002393!2.29e-37!9;CL:0002397!2.29e-37!9;CL:0000134!1.85e-16!358;CL:0002320!5.80e-16!365;CL:0000767!2.62e-14!3;CL:0000219!3.28e-14!390;CL:0000875!1.80e-13!3;CL:0002396!1.80e-13!3;CL:0000842!3.24e-13!3;CL:0000034!2.47e-12!444;CL:0000048!4.13e-12!430;CL:0000723!8.21e-12!436;CL:0000224!5.01e-10!4;CL:0000094!3.11e-09!8;CL:0000080!8.09e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000767;9.34e-29;3!CL:0000875;4.23e-27;3!CL:0002396;4.23e-27;3!CL:0000766;4.86e-27;69!CL:0000576;1.90e-24;48!CL:0000860;1.31e-22;33!CL:0002057;1.31e-22;33!CL:0000094;5.87e-19;8!CL:0000473;1.84e-18;39!CL:0000234;1.84e-18;39!CL:0002393;8.94e-15;6!CL:0002397;8.94e-15;6!CL:0000081;7.49e-14;11!CL:0000763;6.44e-10;100!CL:0002087;2.56e-09;104!CL:0000738;4.08e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.90e-52,42;CL:0002057,3.90e-52,42;CL:0000766,1.21e-46,72;CL:0000473,2.57e-45,48;CL:0000234,2.57e-45,48;CL:0002393,5.94e-36,9;CL:0002397,5.94e-36,9;CL:0002194,9.25e-36,59;CL:0000576,9.25e-36,59;CL:0000040,9.25e-36,59;CL:0000559,9.25e-36,59;CL:0002009,1.58e-34,61;CL:0000839,9.19e-32,66;CL:0000557,2.93e-31,67;CL:0000763,2.70e-30,108;CL:0000049,2.70e-30,108;CL:0000767,9.79e-29,3;CL:0000875,6.08e-27,3;CL:0002396,6.08e-27,3;CL:0000738,3.45e-26,136;CL:0000037,1.17e-20,168;CL:0002087,1.02e-19,115;CL:0000988,1.85e-19,177;CL:0002032,2.06e-19,161;CL:0000837,2.06e-19,161;CL:0000094,5.87e-19,8;CL:0002031,1.94e-16,120;CL:0000081,7.50e-14,11;CL:0000134,3.73e-08,354;CL:0002320,6.23e-08,361;CL:0000219,3.80e-07,386;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-37;42!CL:0000049;1.70e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.83e-58!80;UBERON:0001474!7.23e-54!86;UBERON:0002390!5.29e-53!102;UBERON:0003061!5.29e-53!102;UBERON:0002193!1.50e-47!112;UBERON:0004765!9.74e-45!101;UBERON:0001434!9.74e-45!101;UBERON:0002405!2.40e-38!115;UBERON:0002204!6.22e-24!167;UBERON:0003081!5.54e-22!216;UBERON:0002384!2.76e-15!375 | |ontology_enrichment_uberon=UBERON:0002371!1.83e-58!80;UBERON:0001474!7.23e-54!86;UBERON:0002390!5.29e-53!102;UBERON:0003061!5.29e-53!102;UBERON:0002193!1.50e-47!112;UBERON:0004765!9.74e-45!101;UBERON:0001434!9.74e-45!101;UBERON:0002405!2.40e-38!115;UBERON:0002204!6.22e-24!167;UBERON:0003081!5.54e-22!216;UBERON:0002384!2.76e-15!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-27,76;UBERON:0001474,3.75e-25,82;UBERON:0002390,1.44e-23,98;UBERON:0003061,1.44e-23,98;UBERON:0004765,1.02e-22,90;UBERON:0002405,6.57e-22,93;UBERON:0002193,3.70e-21,108;UBERON:0001434,3.27e-20,100;UBERON:0002204,4.27e-11,167;UBERON:0003081,5.27e-10,203;UBERON:0002384,1.25e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,6.1412703695554,4.4896675761662,0,0,0,0,0,0,8.30993112797816,5.41470008169383,9.76548918221333,0,0,0,0.145398238779565,1.13362783106643,0,1.16214518452842,0,0.619412741790207,0.863077176966451,0.768482119587302,0.945928919554341,3.44745680736619,1.93645405075148,1.35426486594342,0.564727018627814,0,0,2.14258724659632,2.88836124368484,0.639337125799041,0.329851300186716,0.199463657621632,0,1.16083695451434,0,0,2.00998932205395,0,0.434377689410233,0.605399502633369,0.368277635987565,1.89877432464531,0.845021145247767,0.637812899895131,0.838634582033504,0.22465726229299,0.150176892841506,0.32145117339416,1.14005097496499,1.39241674039363,1.0959849225878,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,6.1412703695554,4.4896675761662,0,0,0,0,0,0,8.30993112797816,5.41470008169383,9.76548918221333,0,0,0,0.145398238779565,1.13362783106643,0,1.16214518452842,0,0.619412741790207,0.863077176966451,0.768482119587302,0.945928919554341,3.44745680736619,1.93645405075148,1.35426486594342,0.564727018627814,0,0,2.14258724659632,2.88836124368484,0.639337125799041,0.329851300186716,0.199463657621632,0,1.16083695451434,0,0,2.00998932205395,0,0.434377689410233,0.605399502633369,0.368277635987565,1.89877432464531,0.845021145247767,0.637812899895131,0.838634582033504,0.22465726229299,0.150176892841506,0.32145117339416,1.14005097496499,1.39241674039363,1.0959849225878,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:106725704..106725717,+ | |short_description=p@chr5:106725704..106725717,+ | ||
}} | }} |
Latest revision as of 08:29, 30 July 2015
Short description: | p@chr5:106725704..106725717, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:106725704..106725717, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-27 | 76 |
bone element | 3.75e-25 | 82 |
hematopoietic system | 1.44e-23 | 98 |
blood island | 1.44e-23 | 98 |
skeletal element | 1.02e-22 | 90 |
immune system | 6.57e-22 | 93 |
hemolymphoid system | 3.70e-21 | 108 |
skeletal system | 3.27e-20 | 100 |
musculoskeletal system | 4.27e-11 | 167 |
lateral plate mesoderm | 5.27e-10 | 203 |
connective tissue | 1.25e-07 | 371 |