FFCP PHASE1:Hg19::chr5:158636727..158636752,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-176bp_to_ENST00000521204_5end | |||
|cluster_id=chr5:158636727..158636752,+ | |||
|coexpression_cluster_id=C4481 | |||
|description=CAGE_peak_1_at_ENST00000521204_5end | |||
|id=chr5:158636727..158636752,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.07e-19!45;CL:0002057!8.16e-18!42;CL:0000557!1.88e-16!71;CL:0000988!6.57e-16!182;CL:0000037!2.29e-15!172;CL:0000566!2.29e-15!172;CL:0000738!2.33e-15!140;CL:0000763!3.87e-15!112;CL:0000049!3.87e-15!112;CL:0002032!1.64e-14!165;CL:0000837!1.64e-14!165;CL:0000839!1.88e-14!70;CL:0002031!4.64e-14!124;CL:0000766!1.97e-13!76;CL:0002009!1.87e-12!65;CL:0002194!5.65e-11!63;CL:0000576!5.65e-11!63;CL:0000040!5.65e-11!63;CL:0000559!5.65e-11!63;CL:0002087!1.38e-10!119;CL:0002274!1.20e-08!5;CL:0000457!1.20e-08!5;CL:0002191!1.20e-08!5;CL:0000097!1.20e-08!5;CL:0000831!1.20e-08!5;CL:0002028!1.20e-08!5;CL:0000163!6.11e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.08e-59;5!CL:0000163;7.25e-33;9!CL:0000860;9.17e-20;33!CL:0002057;9.17e-20;33!CL:0000766;1.69e-14;69!CL:0000473;3.22e-13;39!CL:0000234;3.22e-13;39!CL:0000576;2.64e-12;48!CL:0000151;1.28e-07;36!CL:0000763;8.32e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.47e-59,5;CL:0002028,6.47e-59,5;CL:0000163,8.29e-33,9;CL:0000839,2.13e-32,66;CL:0000557,6.75e-32,67;CL:0000766,1.35e-29,72;CL:0000860,2.19e-21,42;CL:0002057,2.19e-21,42;CL:0000763,3.00e-19,108;CL:0000049,3.00e-19,108;CL:0000473,1.37e-18,48;CL:0000234,1.37e-18,48;CL:0002031,3.67e-17,120;CL:0000738,6.06e-15,136;CL:0000988,6.80e-15,177;CL:0002194,1.15e-14,59;CL:0000576,1.15e-14,59;CL:0000040,1.15e-14,59;CL:0000559,1.15e-14,59;CL:0002009,3.68e-14,61;CL:0002032,2.38e-12,161;CL:0000837,2.38e-12,161;CL:0000037,9.27e-12,168;CL:0000151,3.56e-08,36;CL:0002087,4.62e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-13!102;UBERON:0003061!1.78e-13!102;UBERON:0002371!2.66e-13!80;UBERON:0001474!2.58e-12!86;UBERON:0002193!9.92e-12!112;UBERON:0004765!7.04e-09!101;UBERON:0001434!7.04e-09!101;UBERON:0002405!1.41e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.65e-28,98;UBERON:0003061,2.65e-28,98;UBERON:0002371,5.68e-28,76;UBERON:0001474,7.93e-26,82;UBERON:0002193,1.54e-25,108;UBERON:0004765,2.10e-23,90;UBERON:0002405,1.33e-22,93;UBERON:0001434,6.49e-21,100;UBERON:0003081,9.71e-13,203;UBERON:0002204,7.69e-12,167;UBERON:0000926,1.81e-07,315;UBERON:0004120,1.81e-07,315;UBERON:0006603,1.81e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.236132343941038,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,0.929119112685311,0.28769239232215,1.0246428261164,1.18241114944293,0.344745680736619,0,2.70852973188684,0.188242339542605,0,0.898893937780338,0.918251677112708,0.320929027076094,1.91801137739712,0,0,0,0.580418477257168,0.56738522469114,0,0,1.0429658368404,1.52032191293582,0,2.57794345191295,3.79754864929061,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,16.2578868505661,1.05658120815871,11.817702585824,1.29707958075265,6.9433338384509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.47003968731907,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0.392125068635479,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0,0,1.77912677208373,1.23563938946503,0.522109747527277,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,1.9542044523884,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,0,0,0.864328787928898,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0.77380195455795,0.121499113316049,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0.628817220398664,0.828478110694391,0,0,0.243585196761792,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0.337884881306145,0,0,0.303859956177382,0,0.389720617678777,0.664324201566815,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.511577485214607,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000521204 | |||
}} |
Latest revision as of 12:24, 30 July 2015
Short description: | p1@ENST00000521204 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000521204_5end |
Coexpression cluster: | C4481_Mast_CD14_immature_Neutrophils_melanoma_medial_occipital |
Association with transcript: | -176bp_to_ENST00000521204_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.47e-59 | 5 |
basophil mast progenitor cell | 6.47e-59 | 5 |
endocrine cell | 8.29e-33 | 9 |
myeloid lineage restricted progenitor cell | 2.13e-32 | 66 |
granulocyte monocyte progenitor cell | 6.75e-32 | 67 |
myeloid leukocyte | 1.35e-29 | 72 |
classical monocyte | 2.19e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-21 | 42 |
myeloid cell | 3.00e-19 | 108 |
common myeloid progenitor | 3.00e-19 | 108 |
defensive cell | 1.37e-18 | 48 |
phagocyte | 1.37e-18 | 48 |
hematopoietic lineage restricted progenitor cell | 3.67e-17 | 120 |
leukocyte | 6.06e-15 | 136 |
hematopoietic cell | 6.80e-15 | 177 |
monopoietic cell | 1.15e-14 | 59 |
monocyte | 1.15e-14 | 59 |
monoblast | 1.15e-14 | 59 |
promonocyte | 1.15e-14 | 59 |
macrophage dendritic cell progenitor | 3.68e-14 | 61 |
hematopoietic oligopotent progenitor cell | 2.38e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.38e-12 | 161 |
hematopoietic stem cell | 9.27e-12 | 168 |
secretory cell | 3.56e-08 | 36 |
nongranular leukocyte | 4.62e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.65e-28 | 98 |
blood island | 2.65e-28 | 98 |
bone marrow | 5.68e-28 | 76 |
bone element | 7.93e-26 | 82 |
hemolymphoid system | 1.54e-25 | 108 |
skeletal element | 2.10e-23 | 90 |
immune system | 1.33e-22 | 93 |
skeletal system | 6.49e-21 | 100 |
lateral plate mesoderm | 9.71e-13 | 203 |
musculoskeletal system | 7.69e-12 | 167 |
mesoderm | 1.81e-07 | 315 |
mesoderm-derived structure | 1.81e-07 | 315 |
presumptive mesoderm | 1.81e-07 | 315 |